Items where Subject is "Mathematical and Computer Sciences > Mathematics > Applied Mathematics"

A

Abida, R. and Bocquet, M. and Vercauteren, N. and Isnard, O. (2008) Design of a monitoring network over France in case of a radiological accidental release. Atmospheric Environment, 42 (21). pp. 5205-5219. ISSN 1352-2310

Acevedo, W. and de Wiljes, J. and Reich, S. (2017) Second-order accurate ensemble transform particle filters. SIAM J. Sci. Comput., 39 (5). A1834-A1850. ISSN 1095-7197 (online)

Achatz, U. and Klein, R. and Senf, F. (2010) Gravity waves, scale asymptotics, and the pseudo-incompressible equations. Journal of Fluid Mechanics, 663 . pp. 120-147.

Achatz, U. and Ribstein, B. and Senf, F. and Klein, R. The interaction between synoptic-scale balanced flow and a finite-amplitude mesoscale wave field throughout all atmospheric layers: weak and moderately strong stratification. Quarterly Journal of the Royal Meteorological Society . (In Press)

Achatz, U. and Ribstein, B. and Senf, F. and Klein, R. (2017) The interaction between synoptic‐scale balanced flow and a finite‐amplitude mesoscale wave field throughout all atmospheric layers: weak and moderately strong stratification. QJRMS, 143 (702). pp. 342-361.

Agarwal, A. and Delle Site, L. (2015) Path Integral Molecular Dynamics within the Grand Canonical-like Adaptive Resolution Technique: Simulation of Liquid Water. Journal of Chemical Physics, 143 (9). ISSN 0021-9606

Agazzi, Andrea and Andreis, Luisa and Patterson, Robert I. A. and Renger, D.R. Michiel (2021) Large deviations for Markov jump processes with uniformly diminishing rates. arXive . pp. 1-19. (Unpublished)

Agazzi, Andrea and Andreis, Luisa and Patterson, Robert I.A. and Renger, D.R. Michiel (2021) LARGE DEVIATIONS FOR MARKOV JUMP PROCESSES WITH UNIFORMLY DIMINISHING RATES. arXive . pp. 1-19. (Unpublished)

Ague, Jay J. and Tassara, Santiago and Holycross, Megan E. and Li, Jei-Li and Cottrell, Elizabeth and Schwarzenbach, Esther M. and Fassoulas, Charalampos and John, Timm (2022) Slab-derived devolatilization fluids oxidized by subducted metasedimentary rocks. Nature Geoscience, 15 . pp. 320-326.

Alchikh, Maren and Conrad, T. O. F. and Obermeier, Patrick E. and Ma, Xiaolin and Schweiger, Brunhilde and Opota, Onya and Rath, Barbara A. (2024) Disease Burden and Inpatient Management of Children with Acute Respiratory Viral Infections during the Pre-COVID Era in Germany: A Cost-of-Illness Study. Viruses, 16 (4).

Alexandrov, K. and Harlander, U. and Egbers, C. (2010) Definition und Vergleich von Zuständen eines rotierenden Zylinderspalts unter Betrachtung skalenseparierter Strömungsstrukturen. In: 18. Fachtagung Lasermethoden in der Strömungsmesstechnik , 7-9. September 2010, Cottbus.

Alphonse, Amal and Caetano, Diogo and Djurdjevac, Ana and Elliott, Charles M. (2023) Function spaces, time derivatives and compactness for evolving families of Banach spaces with applications to PDEs. Journal of Differential Equations, 353 . pp. 268-338.

Altmann, C. and Gassner, G. and Lörcher, F. and Munz , C.-D. (2009) A Space-Time Expansion Discontinuous Galerkin Scheme With Local Time Stepping for the Ideal and Viscous MHD Equations. IEEE Transactions on Plasma Science, 37 (4). 513 -519 .

Andreis, L. and König, W. and Patterson, R. I. A (2019) A large-deviations approach to gelation. SFB 1114 Preprint in arXiv:1901.01876 . pp. 1-22. (Unpublished)

Andreis, Luisa and König, Wolfgang and Patterson, Robert I.A. (2021) A large‐deviations principle for all the cluster sizes of a sparse Erdős–Rényi graph. Random Structures and Algorithms . pp. 1-32.

Arnold, F. and Tornow, G. and King, R. (2019) Part Load Control for a Shockless Explosion Combustion Cycle. In: Active Flow and Combustion Control 2018. Notes on Numerical Fluid Mechanics and Multidisciplinary Design book series (NNFM, 141 . Springer, Cham, pp. 135-150. ISBN 978-3-319-98176-5

Arts, Marloes and Garcia Sattorras, Victor and Huang, Chin-Wei and Zuegner, Daniel and Federici, Marco and Clementi, Cecilia and Noé, Frank and Pinsler, Robert and van den Berg, Rianne (2023) Two for One: Diffusion Models and Force Fields for Coarse-Grained Molecular Dynamics. JCTC - Journal of Chemical Theory and Computation, 19 . pp. 6151-6159.

Assêncio, D.C. and Teran, J.M. (2012) A Second Order Virtual Node Algorithm for Stokes Flow Problems with Interfacial Forces and Discontinuous Material Properties. Journal of Computational Physics . (Submitted)

Assêncio, D.C. and Teran, J.M. (2011) A Second Order Virtual Node Algorithm for Stokes Flow Problems with Interfacial Forces and Irregular Domains. Journal of Computational Physics . (Submitted)

Atnip, Jason and Froyland, Gary and Koltai, Péter (2024) An inflated dynamic Laplacian to track the emergence and disappearance of semi-material coherent sets. Preprint . (Unpublished)

Audusse, E. and Klein, R. and Owinoh, A.Z. (2009) Conservative Discretization of Coriolis Force. Journal of Computational Physics, 228 (8). pp. 2934-2950.

Audusse, E. and Bouchut, F. and Bristeau, M.O. and Klein, R. and Perthame, B. (2004) A fast and stable well-balanced scheme with hydrostatic reconstruction for shallow water flows. Journal of Scientific Computation, 25 (6). pp. 2050-2065.

Audusse, E. and Klein, R. and Nguyen, D.D. and Vater, S. (2011) Preservation of the discrete geostrophic equilibrium in shallow water flows. In: Finite Volumes for Complex Applications VI - Problems& Perspectives, 6.6.-10.6. 2011, Prague, Czech Republic.

Ayaz, Cihan and Dalton, Benjamin and Netz, Roland R. (2022) Generalized Langevin Equation with a Non-Linear Potential of Mean Force and Non-Linear Friction From a Hybrid Projection Scheme. Preprint . (Unpublished)

Ayaz, Cihan and Scalfi, Laura and Dalton, Benjamin and Netz, Roland R. (2022) Generalized Langevin equation with a nonlinear potential of mean force and nonlinear memory friction from a hybrid projection scheme. PHYSICAL REVIEW E, 105 . pp. 1-19.

Ayaz, Cihan and Tepper, Lucas and Brünig, Florian N. and Daldrop, Jan O. and Netz, Roland R. (2021) Non-Markovian modeling of protein folding. Proceedings of the National Academy of Sciences, 118 (31). pp. 1-7.

Ayaz, Cihan and Tepper, Lucas and Netz, Roland R. (2022) Markovian embedding of generalized Langevin equations with a nonlinear friction kernel and configuration-dependent mass. Turkish Journal of Physics, 46 (6). pp. 194-205.

Azouz, Nurit P. and Klingler, Andrea M. and Callahan, Victoria and Akhrymuk, Ivan V. and Elez, Katarina and Raich, Lluís and Henry, Brandon M. and Benoit, Justin L. and Benoit, Stefanie W. and Noé, Frank and Kehn-Hall, Kylene and Rothenberg, Marc E. (2021) Alpha 1 Antitrypsin is an Inhibitor of the SARS-CoV-2–Priming Protease TMPRSS2. Pathogens and Immunity, 6 (1). pp. 55-74.

B

Bachmayr, m: and Djurdjevac, A. (2020) Multilevel Representations of Isotropic Gaussian Random Fields on the Sphere. : . (Submitted)

Baldauf, M. (2008) Stability analysis for linear discretisations of the advection equation with Runge–Kutta time integration. Journal of Computational Physics, 227 (13). pp. 6638-6659.

Baldauf, M. and Brdar, S. (2013) An analytic solution for linear gravity waves in a channel as a test for numerical models using the non-hydrostatic, compressible Euler equations. Quarterly Journal of the Royal Meteorological Society .

Banerjee, T. and Vercauteren, N. and Muste, M. and Yang, D. (2018) Coherent structures in wind shear induced wave-turbulence-vegetation interaction in water bodies. Agricultural and Forest Meteorology, 255 . pp. 57-67. ISSN 0168-1923

Banisch, R. and Trstanova, Z. and Bittracher, A. and Klus, S. and Koltai, P. (2020) Diffusion maps tailored to arbitrary non-degenerate Ito processes. Applied and computational harmonic analysis, 48 (1). pp. 242-265. ISSN 1063-5203, 1096-603X

Banisch, Ralf and Koltai, Péter and Padberg-Gehle, Kathrin (2019) Network measures of mixing. Chaos: An Interdisciplinary Journal of Nonlinear Science 29, 063125 (2019), 29 . pp. 1-16.

Banisch, Ralf and Koltai, Péter and Padberg-Gehle, Kathrin (2019) Network measures of mixing. Chaos 29, 29 . pp. 1-15.

Bardos, Claude and Boutros, Daniel W. and Titi, Edriss (2023) Hoelder regularity of the pressure for weak solutions of the 3D Euler equations in bounded domains. Preprint . pp. 1-35. (Unpublished)

Bartsch, Clemens and John, Volker and Patterson, Robert I. A. (2019) Simulations of an ASA flow crystallizer with a coupled stochastic-deterministic approach. Computers & Chemical Engineering, 124 . pp. 350-363.

Bartscha, Clemens and Wiedmeyer, Viktoria and Lakdawala, Zahra and Patterson, Robert I.A. and Voigt, Andreas and Sundmacher, Kai and John, Volker (2019) Stochastic-deterministic population balance modeling and simulation of a fluidized bed crystallizer experiment. Chemical Engineering Science, 208 . ISSN 115102

Barua, Amlan K. and Chew, Ray and Li, Shuwang and Lowengrub, John and Münch, A. and Wagner, B. (2021) Sharp-interface problem of the Ohta-Kawasaki model 2 for symmetric diblock copolymers. Journal of Computational Physics . pp. 1-34. ISSN 0021-9991 (Submitted)

Barua, Amlan K. and Chew, Ray and Li, Shuwang and Lowengrub, John and Münch, Andreas and Wagner, Barbara (2023) Sharp-interface problem of the Ohta-Kawasaki model for symmetric diblock copolymers. Journal of Computational Physics, 481 .

Basaric, Danica and Bella, Peter and Feireisl, Eduard and Oschmann, Florian and Titi, Edriss (2022) On the incompressible limit of a strongly stratified heat conducting fluid. On the incompressible limit of a strongly stratified heat conducting fluid . pp. 1-20. (Unpublished)

Bastian, P. and Blatt, M. and Dedner, A. and Engwer, C. and Klöfkorn, R. and Kornhuber, R. and Ohlberger, M. and Sander, O. (2008) A generic grid interface for parallel and adaptive scientific computing. II: Implementation and tests in DUNE. Computing, 82 (2-3). pp. 121-138.

Bastian, P. and Blatt, M. and Dedner, A. and Engwer, C. and Klöfkorn, R. and Ohlberger, M. and Sander, O. (2007) A generic grid interface for parallel and adaptive scientific computing. I: Abstract framework. Computing, 82 (2-3). pp. 103-119.

Bastigkeit, I. and Fischer , R. and Leitl, B. and Schatzmann, M. (2010) Fundamental quality requirements for the generation of LES-specific validation data sets from systematic wind tunnel model experiments. In: Fifth International Symposium on Computational Wind Engineering (CWE2010), May 23-27, 2010, Chapel Hill, North Carolina, USA. (Unpublished)

Bastigkeit, I. and Hertwig, D. and Leitl, B. and Schatzmann, M. (2009) Quality (and quantity) requirements for compiling LES-specific validation data sets from systematic wind tunnel modeling. In: PHYSMOD 2009 - Proceedings of the Conference on Physical Modelling of Flow and Dispersion Phenomena. von Karman Institute for Fluid Dynamic. ISBN 978-2-930389-42-7

Bauer, M. and Baumann, M. and Scheck, L. and Gassmann, A. and Heuveline , V. and Jones, S. (2014) Simulation of tropical-cyclone-like vortices in shallow-water ICON-hex using goal-oriented r-adaptivity. Theoretical and Computational Fluid Dynamics, 28 (1). pp. 107-128. ISSN Print: 0935-4964 Online:1432-2250

Baumann, M. and Heuveline , V. (2010) Evaluation of Different Strategies for Goal Oriented Adaptivity in CFD - Part I: The Stationary Case. Preprint Series of the Engineering Mathematics and Computing Lab, 2010-05 .

Baumann, M. and Heuveline , V. and et al, . Hiflow3 - A Flexible and Hardware-Aware Parallel Finite Element Package. Parallel/High-Performance Object-Oriented Scientific Computing (POOSC'10) . (Submitted)

Bdzil, J.B. and Klein, R. (1994) Weakly Nonlinear Dynamics of Near-CJ Detonation Waves, Combustion in High-Speed Flows. Combustion in High-Speed Flows, J. Buckmaster et al. (eds), . pp. 513-540. ISSN 978-0-7923-2806-3 (ISBN)

Becker, N. and Ulbrich, U. and Klein, R. (2015) Systematic large-scale secondary circulations in a regional climate model. Geophysical Research Letters, 42 (10). 4142-4149 .

Becker, N. and Névir, P. and Klein, R. (2018) Large-scale secondary circulations in a limited area model - the impact of lateral boundaries and resolution. Tellus A: Dynamic Meteorology and Oceanography, 70 (1).

Becker, Simon and Hartmann, Carsten and Redmann, Martin and Richter, Lorenz (2022) Error bounds for model reduction of feedback-controlled linear stochastic dynamics on Hilbert spaces. Stochastic Processes and their Applications, 149 . pp. 107-141.

Becker, Simon and Hartmann, Carsten and Redmann, Martin and Richter, Lorenz (2019) Feedback control theory & Model order reduction for stochastic equations. ArXive . pp. 1-36. (Submitted)

Becker, Simon and Richter, Lorenz (2020) Model order reduction for (stochastic-) delay equations with error bounds. arXive . pp. 1-23. (Submitted)

Beinlich, A. and John, T. and Vrijmoed, J.C. and Tominaga, M. and Podladchikov, Y.Y. (2020) Instantaneous rock transformations in the deep crust driven by reactive fluid flow. nature geoscience, 13 . pp. 307-311.

Belaschk, H.C. and Münch, M. (2009) Anwendung von massiv paralleler Berechnung mit Grafikkarten GPGPU) für CFD-Methoden im Brandschutz. Bauphysik Volume 31 Issue 4, Pages 216 - 226, 31 (4). pp. 216-226.

Bellingeri, C. and Djurdjevac, A. and Friz, P.K. and Tapia, N. (2020) Transport and continuity equations with (very) rough noise. . . (Submitted)

Benacchio, T. (2014) A blended semi-implicit numerical model for weakly compressible atmospheric dynamics. PhD thesis, Freie Universität Berlin.

Benacchio, T. and Bonaventura, L. (2013) Absorbing boundary conditions: a spectral collocation approach. International Journal for Numerical Methods in Fluids, 72 (10.1002/fld.3768). pp. 913-936. ISSN Online: 1097-0363

Benacchio, T. and Bonaventura, L. (2011) A spectral collocation method for the one dimensional shallow water equations on semi-infinite domain. MOX–Report, 34 .

Benacchio, T. and Klein, R. and Dubos, T. and Voitus, F. (2015) Comments on “A Semihydrostatic Theory of Gravity-Dominated Compressible Flow”. Journal of the Atmospheric Sciences , 72 (7). pp. 2850-2851. ISSN Online: 1520-0469 Print: 0022-4928

Benacchio, T. and Klein, R. (2019) A semi-implicit compressible model for atmospheric flows with seamless access to soundproof and hydrostatic dynamics. Monthly Weather Review, 147 (11). pp. 4221-4240. ISSN Online: 1520-0493; Print: 0027-0644

Benacchio, T. and O'Neill, W.P. and Klein, R. (2014) A blended soundproof-to-compressible numerical model for small- to mesoscale atmospheric dynamic. Monthly Weather Review, 142 (12). pp. 4416-4438. ISSN Online:1520-0493; Print: 0027-0644

Bennett, W.P. and Nikiforakis, N. and Klein, R. (2018) A Moving Boundary Flux Stabilization Method for Cartesian Cut-Cell Grids using Directional Operator Splitting. Journal of Computational Physics, 368 . pp. 333-358.

Berg, Mascha and Plöntzke, Julia and Siebert, Heike and Röblitz, Susanna (2021) Modelling Oscillatory Patterns in the Bovine Estrous Cycle with Boolean Delay Equations. Modelling Oscillatory Patterns in the Bovine Estrous Cycle with Boolean Delay Equations .

Berkenbosch, A. and Kaasschieter, E. and Klein, R. (1998) Detonation capturing for stiff combustion chemistry. Combustion Theory and Modelling, 2 (3). 313-348(36).

Berndt, P. (2014) On the Use of the HLL-Scheme or the Simulation of the Multi-Species Euler Equations. In: Finite Volumes for Complex Applications VII-Elliptic, Parabolic and Hyperbolic Problems. Springer, pp. 809-816. ISBN 978-3-319-05590-9 Online: 978-3-319-05591-6

Berndt, P. and Klein, R. (2017) Modeling the kinetics of the Shockless Explosion Combustion. Combustion and Flame, 175 . pp. 16-26.

Berndt, P. and Klein, R. and Paschereit, O. C. (2016) A Kinetics Model For The Shockless Explosion Combustion. In: Turbo Expo Turbomachinery Technical Conference & Exposition, June 13 – 17, 2016 , COEX Convention Center, SEOUL SOUTH KOREA.

Berner, Julius and Richter, Lorenz and Ullrich, Karen (2024) An optimal control perspective on diffusion-based generative modeling. Preprint arXiv . (Unpublished)

Bernhard, S. and Al Zoukra, K. and Schütte, Ch. (2010) From non-invasive hemodynamic measurements towards patient-specific cardiovascular diagnosis. In: Quality Assurance in Healthcare Service Delivery, Nursing and Personalized Medicine. Hershey, PA: Medical Information Science Reference. (Submitted)

Bernhard, S. (2005) Oscillatory flow in a tube with time-dependent wall deformation and its application to Myocardial Bridges. ESAIM: Proc., 14 . pp. 25-40.

Bernhard, S. (2006) Transient integral boundary layer method to calculate the translesional pressure drop and the fractional flow reserve in myocardial bridges. BioMedical Engineering OnLine, 5 (42).

Bernhard, S. (2006) Transient integral boundary layer method to simulate entrance flow conditions in one-dimensional arterial blood flow. PhD thesis, Georg-August-Universität Göttingen.

Bernhard, S. and Al Zoukra, K. and Schütte, Ch. (2011) Statistical parameter estimation and signal classification in cardiovascular diagnosis. In: Modelling in Medicine and Biology. WIT Transactions on Biomedicine and Health, IX (15). WIT Press, Southampton & Boston. ISBN 978-1-84564-546-5

Bienert, A. and Pech, K. and Maas, H.-G (2011) Verfahren zur Registrierung von Laserscannerdaten in Waldbeständen. Schweizerische Zeitschrift für Forstwesen, 162 (6). pp. 178-185.

Bienert, A. and Queck, R. and Schmidt, A. and Bernhofer, C. and Maas, H.-G (2010) Voxel space analysis of terrestrial laser scans in forests for wind field modelling. International Archives of Photogrammetry.Remote Sensing and Spatial Information Sciences, 38 (5). pp. 92-97.

Bienert, A. and Stiel, B. and Queck, R. and Maas, H.-G (2010) Photogrammetrische Bestimmung von statischen und dynamischen Verformungsstrukturen an Einzelbäumen. Allgemeine Vermessungs-Nachrichten, 5 . 190-197..

Bienert, A. and Richter, K. and Stelling, N. and Maas, H.-G (2014) 3D-Vegetationsmodell aus Laserscannerdaten für forstmeteorologische Anwendungen am Beispiel des TurbEFA-Projektes. In: 8. Biomet Tagung "Mensch-Pflanze-Atmosphäre im 21. Jahrhundert", 2.-3.12.14, Dresden.

Bittracher, A. and Koltai, P. and Klus, S. and Banisch, R. and Dellnitz, M. and Schütte, Ch. (2017) Transition manifolds of complex metastable systems: Theory and data-driven computation of effective dynamics. Journal of Nonlinear Science . pp. 1-42. ISSN 1432-1467 (online)

Bittracher, Andreas and Banisch, Ralf and Schütte, Christof (2018) Data-driven computation of molecular reaction coordinates. J. Chem. Phys., 149 (154103).

Bittracher, Andreas and Klus, Stefan and Hamzi, Boumediene and Koltai, Péter and Schütte, Christof (2020) Dimensionality Reduction of Complex Metastable Systems via Kernel Embeddings of Transition Manifolds. Journal of Nonlinear Science, 31 (3). pp. 1-41. ISSN 1432-1467 (online)

Bittracher, Andreas and Klus, Stefan and Hamzi, Boumediene and Koltai, Péter and Schütte, Christof (2020) Dimensionality Reduction of Complex Metastable Systems via Kernel Embeddings of Transition Manifolds. Journal of Nonlinear Science, 31 (3).

Bittracher, Andreas and Mollenhauer, Mattes and Koltai, Péter and Schütte, Ch. (2023) Optimal Reaction Coordinates: Variational Characterization and Sparse Computation. Multiscale Modeling & Simulation, 21 (2). ISSN ISSN (print): 1540-3459 ISSN (online): 1540-3467

Bittracher, Andreas and Mollenhauer, Mattes and Koltai, Péter and Schütte, Christof (2021) Optimal Reaction Coordinates: Variational Characterization and Sparse Computation. ArXiv . pp. 1-36. (Submitted)

Bittracher, Andreas and Mollenhauer, Mattes and Koltai, Péter and Schütte, Christof (2023) Optimal Reaction Coordinates: Variational Characterization and Sparse Computation. Multiscale Modeling & Simulation, 21 (2). pp. 449-488.

Bittracher, Andreas and Moschner, Johann and Koksch, Beate and Netz, Roland R. and Schütte, Christof (2021) Exploring the locking stage of NFGAILS amyloid fibrillation via transition manifold analysis. The European Physical Journal B volume, 94 (195).

Bittracher, Andreas and Schütte, Christof (2021) A probabilistic algorithm for aggregating vastly undersampled large Markov chains. Physica D, 416 . pp. 1-19.

Bittracher, Andreas and Schütte, Christof (2020) A weak characterization of slow variables in stochastic dynamical systems. Studies in Systems, Decision and Control, 304 . pp. 132-150.

Blomberg, S. and Hoffmann, M. and Gustafson, J. and Martin, N. M. and Fernandes, V. R. and Borg, A. and Liu, Z. and Chang, R. and Matera, S. and Reuter, K. and Lundgren, E. (2013) In Situ X-Ray Photoelectron Spectroscopy of Model Catalysts: At the Edge of the Gap. Physical Review Letters, 110 (11). p. 117601.

Blömker, Dirk and Schillings, Claudia and Wacker, Philipp (2018) A strongly convergent numerical scheme from ensemble Kalman inversion. SIAM Journal on Numerical Analysis, 56 (4).

Blumenthal, Alex and Engel, Maximilian and Neamţu, Alexandra (2023) On the pitchfork bifurcation for the Chafee-Infante equation with additive noise. Probability Theory and Related Fields, 187 . pp. 603-627.

Blunck, A. and Mischau, A. and Mehlmann, S. (2014) Gender Competence in Mathematics Teacher Education. In: Gender in Science and Technology. Gender Studies . transcript Verlag, pp. 235-257. ISBN 9783839424346

Blömker, Dirk and Schillings, Claudia and Wacker, Philipp (2017) A strongly convergent numerical scheme from EnKF continuum analysis. ... . (Submitted)

Blömker, Dirk and Schillings, Claudia and Wacker, Philipp and Weissmann, Simon (2022) Continuous time limit of the stochastic ensemble Kalman inversion: Strong convergence analysis. SIAM Journal on Numerical Analysis, 60 (6). pp. 3181-3215.

Blömker, Dirk and Schillings, Claudia and Wacker, Philipp and Weissmann, Simon (2019) Well posedness and convergence analysis of the ensemble Kalman inversion. Inverse Problems, 35 . pp. 1-33.

Bobusch, B. and Berndt, P. and Paschereit, O. C. and Klein, R. (2015) Investigation of fluid devices for mixing enhancemet for the shockless explosion combustion process. In: Active Flow and Combustion Control. Springer International Publishing. ISBN 978-3-319-11966-3 (Print) 978-3-319-11967-0 (Online)

Bobusch, B. and Berndt, P. and Paschereit, O. C. and Klein, R. (2013) Shockless explosion combustion - An innovative way of efficient constant volume combustion in gas turbines. In: 24th ICDERS Conference Proceedings, , 2013, Taipei, Taiwan.

Bobusch, B. and Berndt, P. and Paschereit, O. C. and Klein, R. (2014) Shockless explosion combustion: An innovative way of efficient constant volume combustion in gas turbines. Combustion Science and Technology, 186 (10-11). pp. 1680-1689.

Bogdanow, Boris and Gruska, Iris and Mühlberg, Lars and Protze, Jonas and Hohensee, Svea and Vetter, Barbara and Bosse, Jens B. and Lehmann, Martin and Sadeghi, Mohsen and Wiebusch, Lüder and Liu, Fan (2023) Spatially resolved protein map of intact human cytomegalovirus virions. Nature Microbiology, 8 . pp. 1732-1747.

Boger, M. and Jägle, F. and Munz , C.-D. and Klein, R. (2015) Coupling of compressible and incompressible flow regions using the multiple pressure variables approach. Mathematical Methods in the Applied Sciences, 38 (3). pp. 458-477.

Boltz, Horst-Holger and Sirbu, Alexei and Stelzer, Nina and de Lanerolle, Primal and Winkelmann, Stefanie and Annibale, Paolo (2022) The impact of membrane protein diffusion on GPCR signaling. Cells, 11 (10).

Bonetti, E. and Rocca, E. and Rossi, R. and Thomas, M. (2016) A rate-independent gradient system in damage coupled with plasticity via structured strains. ESAIM: Proceedings and Surveys, 54 . pp. 54-69.

Bordas, R. and Hanke, K. and Bencs, P. and Thévenin, D. (2009) 2D-PIV Measurements in a Two-Phase Wind Tunnel Normal to the Main Flow. In: XXIII. microCAD International Scientific Conference, Miskolc, Hungary.

Bordas, R. and Thévenin, D. (2009) Modeling cumulus clouds in a two-phase wind tunnel. In: EGU General Assembly 2009, Vienna, Austria.

Bordás, R. and Hagemeier, T. and Thévenin, D. (2010) Experimental Investigation of Droplet-Droplet Interactions. 23rd European Conference on Liquid Atomization and Spray Systems . 198.1-198.6. ISSN 978-80-7399-997-1

Bordás, R. and Hagemeier, T. and Wunderlich, B. and Thévenin, D. (2011) Droplet Collisions and Interaction with the Turbulent Flow within a Two-Phase Wind Tunnel. Physics of Fluids, 23 (8). ISSN 1070-6631 (print) 1089-7666 (online)

Bordás, R. and John, V. and Schmeyer, E. and Thévenin, D. (2012) Measurement and Simulation of a Droplet Population in a Turbulent Flow Field. Computers and Fluids . (Submitted)

Bordás, R. and Roloff, CH. and Thévenin, D. and Shaw, R.A. (2013) Experimental determination of droplet collision rates in turbulence. New Journal of Physics, 15 (045010 ).

Borrell, Enric Ribera and Quer, Jannes and Richter, Lorenz and Schütte, Christof (2023) Improving control based importance sampling strategies for metastable diffusions via adapted metadynamics. Preprint to appear in SISC 2024 . (In Press)

Borzì, Alfio and Schulz, Volker H. and Schillings, Claudia and von Winckel, Gregory (2010) On the treatment of distributed uncertainties in PDE‐constrained optimization. GAMM-Mitteilungen, 33 (2). pp. 230-246.

Bostanci, Inan and Conrad, T. O. F. (2024) Integrating Agent-Based and Compartmental Models for Infectious Disease Modeling: A Novel Hybrid Approach. Journal of Artificial Societies and Social Simulation . (Submitted)

Botta, N. and Klein, R. and Almgren, A. (2000) Asymptotic Analysis of a Dry Atmosphere. In: Proc. 3rd Europ. Conf. on Num. Math., Jyväskylä, Finland.

Botta, N. and Klein, R. and Almgren, A. (1999) Dry Atmosphere Asymptotics. Technical Report. PIK Report, Summary Report No. 55.

Botta, N. and Klein, R. and Langenberg, S. and Lützenkirchen, S. (2004) Well Balanced Finite Volume Methods for Nearly Hydrostatic Flows. Journal of Computational Physics, 196 (2). pp. 539-565.

Bou-Zeid, E. and Vercauteren, N. and Parlange, M. B. and Meneveau, C. (2008) Scale dependence of subgrid-scale model coefficients: An a priori study. Physics of Fluid, 20 (115106).

Bouanani, Hafida and Hartmann, Carsten and Kebiri, Omar (2021) Model reduction and uncertainty quantification of multiscale diffusions with parameter uncertainties using nonlinear expectations. arXive . pp. 1-22. (Submitted)

Boutros, Daniel W. and Markfelder, Simon and Titi, Edriss (2023) Nonuniqueness of generalised weak solutions to the primitive and Prandtl equations. arXiv . pp. 1-73. (Unpublished)

Boyko, V. and Krumscheid, S. and Vercauteren, N. (2021) Statistical learning of non-linear stochastic differential equations from non-stationary time-series using variational clustering. . . (Submitted)

Boyko, V. and Vercauteren, N. (2020) Multiscale Shear Forcing of Turbulence in the Nocturnal Boundary Layer: A Statistical Analysis. Boundary-Layer Meteorology, 177 (2-3). ISSN Electronic: 1573-1472; Print: 0006-8314

Braack, M. and Burman, E. and Taschenberger, N. (2011) Duality based a posteriori error estimation for quasi periodic solutions using time averages. SIAM J. Scientific Computing, 33 (10.1137/100809519). pp. 2199-2216. ISSN print: 1064-8275; online: 1095-7197

Braack, M. and Lang, J. and Taschenberger, N. (2012) Hierarchical a posteriori residual based error estimators for bilinear finite elements. Comput. Meth. Appl. Mech. Eng. . (Submitted)

Braack, M. and Taschenberger, N. (2013) Hierarchical a posteriori residual based error estimators for bilinear finite elements. Int. J. Numer. Anal. Model., 10 (2). pp. 466-480. (Submitted)

Brdar, S. and Baldauf, M. and Dedner, A. and Klöfkorn, R. (2012) Comparison of dynamical cores for NWP models. Theoretical and Computational Fluid Dynamics . ISSN 0935-4964 (In Press)

Brdar, S. and Dedner, A. and Klöfkorn, R. (2012) CDG Method for Navier-Stokes Equations. In: Hyperbolic Problems - Theory, Numerics and Applications. World Scientific Publishing Co Pte Ltd, pp. 320-327. ISBN 9789814417068

Brdar, S. and Dedner, A. and Klöfkorn, R. (2011) Compact and Stable Discontinuous Galerkin Methods with Application to Atmospheric Flows. In: Computational Methods in Science and Engineering. KIT Scientific Publishing., pp. 109-116. ISBN 978-3-86644-693-9

Brdar, S. and Dedner, A. and Klöfkorn, R. (2012) Compact and stable Discontinuous Galerkin methods for convection-diffusion problems. SIAM Journal of Scientific Computation, 34 (1). 263-282 . ISSN Print: 1064-8275 Online: 1095-7197

Brdar, S. and Dedner, A. and Klöfkorn, R. and Kränkel, M. and Kröner, D. (2009) Simulation of Geophysical Problems with Dune-Fem. The 4th Russian-German Advanced Research Workshop, 115 . ., Notes on Numerical Fluid Mechanics and Multidisciplinary Design. ISBN 10:3-642-17769-7

Breiten, T. and Hartmann, Carsten and Neureither, Lara and Sharma, Upanshu (2021) Stochastic gradient descent and fast relaxation to thermodynamic equilibrium: a stochastic control approach. Journal of Mathematical Physics, 62 (12). pp. 1-19.

Breitung, W. and Chan, C. and Dorofeev, S.B. and Eder, A. and Gelfand, B.E. and Heitsch, M. and Klein, R. and Malliakos, A. and Shepherd, J.E. and Studer, E. and Thibault, P. (2000) State of Art Report on Flame Acceleration and DDT in Nuclear Reactor Safety. OECD .

Bresch, D. and Klein, R. and Liu, X. (2022) The Soundproof Model of an Acoustic–internal Waves System with Low Stratification. Journal of Mathematical Fluid Mechanics, 24 (149). ISSN 1422-6928 (Print) 1422-6952 (Online)

Bresch, D. and Klein, R. and Liu, X. (2022) The soundproof model of an acoustic-internal waves system with low stratification. Journal of Mathematical Fluid Mechanics, 25 (2). ISSN Electronic 1422-6952; Print 1422-6928

Bresch, D. and Klein, R. and Lucas, C. (2011) Multiscale analyses for the Shallow Water equations. Computational Science and High Performance Computing IV, 115/20 . pp. 149-164. ISSN 1612-2909 (Print) 1060-0824 (Online)

Bryant, Patrick and Kelkar, Atharva and Guljas, Andrea and Clementi, Cecilia and Noé, Frank (2024) Structure prediction of protein-ligand complexes from sequence information with Umol. Nature Communications, 15 .

Bryant, Patrick and Noé, Frank (2024) Improved Protein Complex Prediction with AlphaFold-Multimer by Denoising the MSA Profile. PLOS Computational Biology, 20 (7).

Brösigke, G. and Jens-Uwe Repke, J.U. and Schomäcker, R. and Matera, S. (2022) The closer the better? Theoretical assessment of the impact of catalytic site separation for bifunctional core–shell catalyst particles. Chemical Engineering Journal, 446 (1).

Brünig, Florian N. and Daldrop, Jan O. and Netz, Roland R. (2022) Pair-Reaction Dynamics in Water: Competition of Memory, Potential Shape, and Inertial Effects. J. Phys. Chem. B, 126 . pp. 1-10.

Brünig, Florian N. and Geburtig, Otto and von Canal, Alexander and Kappler, Julian and Netz, Roland R. (2022) Time-dependent friction effects on vibrational infrared frequencies and line shapes of liquid water. J. Phys. Chem. B, 126 . pp. 1579-1589.

Bäumer, D. and Hittmeir, S. and Klein, R. (2023) Scaling approaches to quasi-geostrophic theory for moist, precipitating air. J. Atmos. Sci. . pp. 1-18.

Büeler, Dominik and Pfahl, Stephan (2017) Potential Vorticity Diagnostics to Quantify Effects of Latent Heating in Extratropical Cyclones. Part I: Methodology. Journal of the Atmospheric Sciences, 74 (11).

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Cao, Chongsheng and Li, Jinkai and Titi, Edriss S. and Wang, Dong (2024) Global well-posedness of the 3D primitive equations with horizontal viscosity and vertical diffusivity II: close to H1 initial data. arXiv (Preprint) . (Unpublished)

Carlson, Shane and Brünig, Florian N. and Loche, Philip and Bonthuis, Douwe Jan and Netz, Roland R. (2020) Exploring the Absorption Spectrum of Simulated Water from MHz to Infrared. The Journal of Physical Chemistry A, 124 (27). pp. 5599-5605. ISSN 1089-5639

Carqué, G. (2009) Derivation and Validation of an Asymptotic Column Model for Deep Convective Precipitating Clouds. PhD thesis, Freie Universität Berlin.

Carqué, G. and Schmidt, H. and Stevens, B. and Klein, R. (2008) Plausibility Check of an Asymptotic Column Model for Deep Convective Clouds. ZIB-Report, 08 (44).

Carqué, G. and Owinoh, A.Z. and Klein, R. and Majda, A. J. (2008) Asymptotic Scale Analysis of Precipitating Clouds. ZIB-Report, 08-03 . ISSN 1438-0064

Chada, Neil and Schillings, Claudia and Tong, Xin and Weissmann, Simon (2022) Consistency analysis of bilevel data-driven learning in inverse problems. Communications in Mathematical Sciences, 20 (1). pp. 123-164.

Chada, Neil and Schillings, Claudia and Weissmann, Simon (2019) On the incorporation of box-constraints for ensemble Kalman inversion. Foundations of Data Science, 1 (4). pp. 433-456.

Charron, Nicholas E. and Musil, Felix and Guljas, Andrea and Chen, Yaoyi and Bonneau, Klara and Pasos-Trejo, Aldo S. and Venturin, Jacopo and Gusew, Daria and Zaporozhets, Iryna and Krämer, Andreas and Templeton, Clark and Kelkar, Atharva and Durumeric, Alexander E.P. and Olsson, Simon and Pérez, Adrià and Majewski, Maciej and Husic, Brooke E. and Patel, Ankit and Fabritiis, Gianni De and Noé, Frank and Clementi, Cecilia (2023) Navigating protein landscapes with a machine-learned transferable coarse-grained model. Preprint . (Unpublished)

Chemnitz, Dennis and Engel, Maximilian (2023) Positive Lyapunov Exponent in the Hopf Normal Form with Additive Noise. Communications in Mathematical Physics, 402 . pp. 1807-1843.

Chemnitz, Robin and Engel, Maximilian and Koltai, Péter (2023) Continuous-time extensions of discrete-time cocycles. Contemporary Mathematics . (In Press)

Chemnitz, Robin and Engel, Maximilian and Koltai, Péter (2024) Extracting coherent sets in aperiodically driven flows from generators of Mather semigroups. Preprint . (Unpublished)

Chemnitz, Robin and Engel, Maximilian and Olicón-Mendez, Guillermo (2024) Random attractors on countable state spaces. Preprint arXiv . (Unpublished)

Chen, Shuo and Hin, Remco C. and John, Timm and Bryan, Ben and Nui, Yaoling and Elliott, Tim and Brooker, R. (2019) Molybdenum systematics of subducted crust record reactive fluid flow from underlying slab serpentine dehydration. nature communications . pp. 1-9.

Chen, Yaoyi and Krämer, Andreas and Charron, Nicholas E. and Husic, Brooke E. and Clementi, Cecilia and Noé, Frank (2021) Machine learning implicit solvation for molecular dynamics. The Journal of Chemical Physics, 155 (084101). pp. 1-15.

Chew, R. and Benacchio, T. and Hastermann, G. and Klein, R. (2021) Balanced data assimilation with a blended numerical model. Monthly Weather Review . pp. 1-43. (Submitted)

Chew, R. and Benacchio, T. and Hastermann, G. and Klein, R. (2022) A one-step blended soundproof-compressible model with balanced data assimilation: theory and idealised tests. Monthly Weather Review, 150 (9). pp. 2231-2254. ISSN 0027-0644; elSSN: 1520-0493

Chew, R. and Schlutow, M. and Klein, R. (2022) Instability of the isothermal, hydrostatic equatorial atmosphere at rest under the full Coriolis acceleration. J. Atmos. Sci. . (Submitted)

Chew, R. and Schlutow, M. and Klein, R. (2023) An unstable mode of the stratified atmosphere under the non-traditional Coriolis acceleration. Journal of Fluid Mechanics, 967 .

Chowdhary, Suvrat and Moschner, Johann and Mikolajczak, Dorian J. and Becker, Maximilian and Thünemann, Andreas F. and Kästner, Claudia and Klemczak, Damian and Stegemann, Anne-Katrin and Böttcher, Christoph and Metrangolo, Pierangelo and Netz, Roland R. and Koksch, Beate (2020) The Impact of Halogenated Phenylalanine Derivatives on NFGAIL Amyloid Formation. ChemBioChem, 21 . pp. 3544-3554.

Church, L. and Djurdjevac, A. and Elliott, C.M. (2020) A domain mapping approach for elliptic equations posed on random bulk and surface domains. Numerische Mathematik, 146 . pp. 1-49. ISSN Electronic: 0945-3245; Print: 0029-599X

Chustagulprom, N. and Reich, S. and Reinhardt, M. (2016) A Hybrid Ensemble Transform Particle Filter for Nonlinear and Spatially Extended Dynamical Systems. SIAM/ASA Journal on Uncertainty Quantification, 4 (1). pp. 592-608. ISSN 2166-2525

Ciccotti, G. and Delle Site, L. (2019) The physics of open systems for the simulation of complex molecular environments in soft matter. Soft Matter, 15 (10). pp. 2114-2124. ISSN 1744-683X, ESSN: 1744-6848

Cockburn, B. (2003) Discontinuous Galerkin methods. ZAMM - Zeitschrift für Angewandte Mathematik und Mechanik, 83 (11). 731 -754.

Coghi, Michele and Nilssen, Torstein and Nüsken, Nikolas (2021) Rough McKean-Vlasov dynamics for robust ensemble Kalman filtering. arXive . pp. 1-41. (Submitted)

Coghi, Michele and Nilssen, Torstein and Nüsken, Nikolas and Reich, Sebastian (2023) Rough McKean–Vlasov dynamics for robust ensemble Kalman filtering. The Annals of Applied Probability, 33 (6b). pp. 5693-5752.

Corbi, F. and Bedford, J. and Sandri, L. and Funiciello, F. and Gualandi, A. and Rosenau, M. (2020) Predicting Imminence of Analog Megathrust Earthquakes With Machine Learning: Implications for Monitoring Subduction Zones. Geophysical Research Letters . pp. 1-10. ISSN 1944-8007

Corbi, F. and Funiciello, F. and Brizzi, S. and Lallemand, S. and Rosenau, M. (2017) Control of asperities size and spacing on seismic behavior of subduction megathrusts. Geophysical Research Letters, 44 (16). pp. 8227-8235.

Corbi, F. and Sandri, L. and Bedford, J. and Funiciello, F. and Brizzi, S. and Rosenau, M. and Lallemand, S. (2019) Machine Learning Can Predict the Timing and Size of Analog Earthquakes. Geophysical Research Letters, 46 (3). pp. 1303-1311. ISSN 0094-8276; ESSN: 1944-8007

Cortes-Huerto, Robinson and Praprotnik, Matej and Kremer, Kurt and Delle Site, Luigi (2021) From Adaptive Resolution to Molecular Dynamics of Open Systems. The European Physical Journal B, 94 (189). pp. 1-22.

Craig, G.C. and Dörnbrack, A. (2008) Entrainment in Cumulus Clouds: What resolution is cloud resolving? J. Atmos. Sci., 65 . pp. 3978-3988. ISSN Online 1520-0469 Print 0022-4928

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Daldrop, J.O. and Kappler, J. and Brünig, F.N. and Netz, R.R. (2018) Butane dihedral angle dynamics in water is dominated by internal friction. PNAS, 20 (115). pp. 5169-5174. ISSN 1091-6490 (online)

Daldrop, J.O. and Kowalik, B.G. and Netz, R.R. (2017) External Potential Modifies Friction of Molecular Solutes in Water. Phys. Rev. X, 7 (4). 041065.

Daldrop, Jan O. and Netz, Roland R. (2019) Mass-Dependent Solvent Friction of a Hydrophobic Molecule. J. Phys. Chem. B (123). pp. 8123-8130.

Dedner, A. and Klöfkorn, R. (2011) A Generic Stabilization Approach for Higher Order Discontinuous Galerkin Methods for Convection Dominated Problems. J. Sci. Comput. . (Submitted)

Dedner, A. and Klöfkorn, R. (2009) Stabilization for discontinuous Galerkin methods applied to systems of conservation laws. Hyperbolic problems. Theory, numerics and applications. Plenary and invited talks, 67 (1). American Mathematical Society, Proceedings of the 12th international conference on hyperbolic problems, 253-268 . ISBN 978-0-8218-4729-9/hbk; 978-0-8218-4728-2/2-vol. set

Dedner, A. and Klöfkorn, R. and Nolte, M. and Ohlberger, M. (2010) A generic interface for parallel and adaptive discretization schemes: Abstraction principles and the DUNE-FEM module. Computing, 90 (3-4). pp. 165-196.

Delle Site, L. (2016) Formulation of Liouville's theorem for grand ensemble molecular simulations. Physical Review E, 93 (022130).

Delle Site, L. and Ciccotti, G. and Hartmann, C. (2017) Partitioning a macroscopic system into independent subsystems. Journal of Statistical Mechanics: Theory and Experiment, 2017 . pp. 1-13.

Delle Site, L. and Klein, R. (2022) Derivation of Liouville-like equation for the n-state probability density of an open system with thermalized particle reservoirs and its link to molecular simulation. J. Physics A:Math. Theor., 55 (15).

Delle Site, L. and Klein, R. (2020) Liouville-type equations for the n-particle distribution functions of an open system. Journal of Mathematical Physics, 61 (8).

Delle Site, L. and Klein, R. and Höfling, F. and Viand, R. E. (2020) Theory and simulation of open systems out of equilibrium. J. Chem. Phys. (2020);, 153 (10). pp. 1-7. ISSN 101102

Delle Site, L. and Krekeler, C. and Whittaker, J. and Agarwal, A. and Klein, R. and Höflling, F. (2019) Molecular dynamics of open systems: construction of a mean-field particle reservoir. Adv. Th. Simul, 2 (5).

Delle Site, L. and Praprotnik, M. and Bell, J. B. and Klein, R. (2020) Particle–Continuum Coupling and its Scaling Regimes: Theory and Applications. Advanced Theory and Simulation, 3, 1900232 (2020), 3 (190023). pp. 1-20.

Delle Site, L. and Praprotnik, M. and Bell, John B. and Klein, R. (2020) "Particle-Continuum Coupling and its Scaling Regimes: Theory and Applications". Advanced Theory and Simulations, 3 (5).

Delle Site, Luigi (2021) Investigation of water-mediated intermolecular interactions with the adaptive resolution simulation technique. Journal of Physics: Condensed Matter, 34 (11). pp. 1-15.

Delle Site, Luigi and Djurdjevac, Ana (2024) An effective Hamiltonian for the simulation of open quantum molecular systems. Journal of Physics A: Mathematical and Theoretical, 57 (25).

Delle Site, Luigi and Hartmann, Carsten (2024) Computationally feasible bounds for the free energy of nonequilibrium steady states, applied to simple models of heat conduction. Molecular Physics .

Delle Site, Luigi and Hartmann, Carsten (2024) Scaling law for the size dependence of a finite-range quantum gas. Physical Review A, 109 (2).

Delle Site, Luigi and Hartmann, Carsten (2024) Scaling law for the size dependence of a short-ranged quantum gas. Physical Review A, 109 .

Detring, Carola and Müller, Annette and Schielicke, Lisa and Névir, Peter and Rust, Henning W. (2020) Atmospheric blocking types: Frequencies and transitions. European Geosiences Union . pp. 1-33. (Submitted)

Detring, Carola and Müller, Annette and Schielicke, Lisa and Névir, Peter and Rust, Henning W. (2021) Occurrence and transition probabilities of omega and high-over-low blocking in the Euro-Atlantic region. Weather Clim. Dynamics, 2 . pp. 927-952.

Dewar, W. and Schoonover, J. and McDougall, T. and Klein, R. (2016) Semicrompressible Ocean Thermodynamics and Boussinesq Energy Conservation. Fluids, 1 (9).

Di Giuseppe, E. and Corbi, F. and Funiciello, F. and Massmeyer, A. and Santimano, T.N. and Rosenau, M. and Davaille, A. (2015) Characterization of Carbopol hydrogel rheology for experimental tectonics and geodynamics, , 642, 29-45, doi:10.1016/j.tecto.2014.12.005. Tectonophysics . pp. 29-45.

Dibak, M. and del Razo, M.J. and De Sancho, D. and Schütte, Ch. and Noé, F. (2018) MSM/RD: Coupling Markov state models of molecular kinetics with reaction-diffusion simulations. Journal of Chemical Physics, 148 (214107). ISSN 0021-9606

Dibak, Manuel and Fröhner, Christoph and Noé, Frank and Höfling, Felix (2019) Diffusion-influenced reaction rates in the presence of pair interactions. The Journal of Chemical Physics, 151 (16).

Dibak, Manuel and Klein, Leon and Krämer, Andreas and Noé, Frank (2022) Temperature steerable flows and Boltzmann generators. Physical Review Research, 4 (4).

Djordjevic, N. and Hanraths, N. and Gray, J. and Berndt, P. and Moeck, J. (2017) Numerical Study on the Reduction of NOx Emissions From Pulse Detonation Combustion. In: ASME GT2017.

Djordjevic, N. and Hanraths, N. and Gray, J. and Berndt, P. and Moeck, J. (2017) Numerical study on the abatement of NOx emissions from pulse detonation combustion. In: ASME Proceedings | Combustion, Fuels and Emissions. The American Society of Mechanical Engineers. ISBN 978-0-7918-5085-5

Djurdjevac, A. (2017) Advection-diffusion equations with random coefficients on evolving hypersurfaces. Interfaces and Free Boundaries, 19 (4). pp. 525-552. ISSN 1463-9963

Djurdjevac, A. (2021) Linear Parabolic Problems in Random Moving Domains. ASA Jounal on Uncertainty Quantification, 9 (2).

Djurdjevac, Ana and Kremp, Helena and Perkowski, Nicolas (2022) Rough homogenization for Langevin dynamics on fluctuating Helfrich surfaces. Preprint arXiv . (Unpublished)

Djurdjevac, Ana and Kremp, Helena and Perkowski, Nicolas (2024) Weak error analysis for a nonlinear SPDE approximation of the Dean-Kawasaki equation. Stochastics and Partial Differential Equations: Analysis and Computations .

Djurdjevac, N. and Sarich, M. and Schütte, Ch. (2010) On Markov State Models for Metastable Processes. In: ICM 2010.

Djurdjevac Conrad, Nataša and Köppl, Jonas and Djurdjevac, Ana (2022) Feedback Loops in Opinion Dynamics of Agent-Based Models with Multiplicative Noise. Entropy, 24 (10). pp. 1-23.

Dolaptchiev, S. (2008) Asymptotic models for planetary scale atmospheric motions. PhD thesis, Freie Universität Berlin.

Dolaptchiev, S. and Klein, R. (2007) Model Equations For Atmospheric Motions on Planetary Scales. In: European Geosciences Union, Vienna.

Dolaptchiev, S. and Klein, R. (2009) Planetary geostrophic equations for the atmosphere with evolution of the barotropic flow. Dynamics of Atmospheres and Oceans Volume, 46 (1-4). pp. 46-61.

Dolaptchiev, S. and Klein, R. (2016) A multi-scale model for the planetary and synoptic motions in the atmosphere. In: Annual Meeting of the European Geophysical Union, 2016, Frankfurt. (Unpublished)

Dolaptchiev, S. and Klein, R. (2013) A multi-scale model for the planetary and synoptic motions in the atmosphere. J. Atmos. Sci., 70 (9). pp. 2963-2981. ISSN Online:1520-0469; Print: 0022-4928

Dolores-Tesillos, Edgar and Pfahl, Stephan (2024) Future changes in North Atlantic winter cyclones in CESM-LE – Part 2: A Lagrangian analysis. Weather and Climate Dynmics, 5 . pp. 163-179.

Dolores-Tesillos, Edgar and Teubler, Franziska and Pfahl, Stephan (2022) Future changes in North Atlantic winter cyclones in CESM-LE – Part 1: Cyclone intensity, potential vorticity anomalies, and horizontal wind speed. Weather Clim. Dynam., 3 . pp. 429-448.

Donati, L. and Hartmann, C. and Keller, B.G. (2017) Girsanov reweighting for path ensembles and Markov state models. Journal of Chemical Physics, 146 (24). p. 244112. ISSN 0021-9606

Donati, L. and Heida, M. and Weber, M. and Keller, B. (2018) Estimation of the infinitesimal generator by square-root approximation. Journal of Physics: Condensed Matter, 30 (42). p. 425201. ISSN 0953-8984, ESSN: 1361-648X

Donati, Luca and Keller, Bettina G. (2018) Girsanov reweighting for metadynamics simulations. J. Chem. Phys. 149, 149 . pp. 1-16.

Donati, Luca and Weber, Marcus and Keller, Bettina (2022) A review of Girsanov reweighting and of square root approximation for building molecular Markov state models. J. Math. Phys., 63 (12). pp. 1-22.

Donati, Luca and Weber, Marcus and Keller, Bettina G. (2021) Markov models from the square root approximation of the Fokker–Planck equation: calculating the grid-dependent flux. J. Phys.: Condens. Matter, 33 . pp. 1-15.

Dondl, Patrick and Frenzel, Thomas and Mielke, Alexander (2019) A gradient system with a wiggly energy and relaxed EDP-convergence. ESAIM Control Optimisation and Calculus of Variations, 25 (68). pp. 1-45.

Doppler, Sabine and Klein, Rupert and Liu, Xin and Titi, Edriss (2024) Local well-posedness of a system coupling compressible atmospheric dynamics and a micro-physics model of moisture in air. Preprint arXiv . (Unpublished)

Doyle, J.D. and Grubišić, V. and Brown, W.O.J. and De Wekker, S.F.J. and Dörnbrack, A. and Jiang, Q. and Mayor, S.D. and Weissman, M. (2008) Observations and Numerical Simulations of Subrotor Vortices during T-REX. J. Atmos. Sci., 66 (5). ISSN Online 1520-0469 Print 0022-4928

Drähne, U. and Goseberg, N. and Vater, S. and Beisiegel, N. and Behrens, J. (2016) An Experimental and Numerical Study of Long Wave Run-Up on a Plane Beach. J. Mar. Sci. Eng., 4 (1). ISSN EISSN 2077-1312

Dumbser, M. and Gassner, G. and Munz , C.-D. (2009) Discontinuous Galerkin-Verfahren für zeitabhängige Advektions-Diffusions-Gleichungen. Jahresbericht der DMV, 111 (3). pp. 87-123.

Duncan, A. and Nüsken, N. and Szpruch, L. (2019) On the geometry of Stein variational gradient descent. SFB 1114 Preprint in arXiv:1912.00894 . (Unpublished)

Dupuis, P. and Yufei, L. and Plattner, N. and Doll, J. D. (2012) On the infinite swapping limit for parallel tempering. Multiscale Modeling & Simulation, 10 (3). pp. 986-1022.

Durumeric, Aleksander E.P. and Chen, Yaoyi and Noé, Frank and Clementi, Cecilia Learning data efficient coarse-grained molecular dynamics from forces and noise. Preprint arXiv . (Unpublished)

Durumeric, Alexander E.P. and Charron, Nicholas E. and Templeton, Clark and Musil, Félix and Bonneau, Klara and Pasos-Trejo, Aldo S. and Chen, Yaoyi and Kelkar, Atharva and Noé, Frank and Clementi, Cecilia (2023) Machine learned coarse-grained protein force-fields: Are we there yet? Current Opinion in Structural Biology, 79 .

Duwal, S. and Schütte, Ch. and von Kleist, M. (2012) Pharmacokinetics and Pharmacodynamics of the Reverse Transcriptase Inhibitor Tenofovir & Prophylactic Efficacy against HIV-1 Infection. PLoS One, 7 (7). e40382.

Dyhr, Michael C. A. and Sadeghi, Mohsen and Moynova, Ralista and Knappe, Carolin and Burcu Kepsutlu, Çakmak and Werner, Stephan and Schneider, Gerd and McNally, James and Noé, Frank and Ewers, Helge (2023) 3D surface reconstruction of cellular cryo-soft X-ray microscopy tomograms using semisupervised deep learning. Proceedings of the National Academy of Sciences of the United States of America (PNAS), 120 (24).

Döpking, S. and Plaisance, C.P. and Strobusch, D. and Reuter, K. and Scheurer, C. and Matera, S. (2018) Addressing Global Uncertainty and Sensitivity in First-Principles Based Microkinetic Models by an Adaptive Sparse Grid Approach. AIP The Journal of Chemical Physics, 148 (3).

Dörffel, T. and Papke, A. and Klein, R. and Ernst, Natalia and Smolarkiewicz, Piotr K. (2021) Dynamics of tilted atmospheric vortices under asymmetric diabatic heating. Theoretical and Computational Fluid Dynamics .

Dörffel, T. and Papke, A. and Klein, R. and Smolarkiewicz, P. (2017) Intensification of tilted atmospheric vortices by asymmetric diabatic heating. SFB 1114 Preprint in arXiv:1708.07674 . pp. 1-22. (Unpublished)

de Souza, L.G.M. and Janiga, G and John, V. and Thévenin, D. (2010) Reconstruction of a distribution from a finite number of moments with an adaptive spline-based algorithm. Chemical Engineering Science, 65 (9). pp. 2741-2750.

de Wiljes, J. and Majda, A.J. and Horenko, I. (2013) An adaptive Markov Chain Monte Carlo approach to time series clustering of processes with regime transition behavior. SIAM Multiscale Modeling & Simulation, 11 (2). pp. 415-441. ISSN print: 1540-3459; online: 1540-3467

de Wiljes, J. and Putzig, L. and Horenko, I. (2014) Discrete nonhomogeneous and nonstationary logistic and Markov regression models for spatiotemporal data with unresolved external influences. Communications in Applied Mathematics & Computational Science, 9 . pp. 1-46. ISSN 1559-3940

del Razo, M.J. and Qian, H. and Noé, F. (2018) Grand canonical diffusion-influenced reactions: a stochastic theory with applications to multiscale reaction-diffusion simulations. J. Chem. Phys., 149 (4). 044102. ISSN 0021-9606, ESSN: 1089-7690

del Razo, M.J. and Winkelmann, S. and Klein, R. and Höfling, F. (2023) Chemical diffusion master equation: formulations of reaction–diffusion processes on the molecular level. J. Math. Phys., 64 (013304).

del Razo, Mauricio J. and Dibak, Manuel and Schütte, Christof and Noé, Frank (2021) Multiscale molecular kinetics by coupling Markov state models and reaction-diffusion dynamics. The Journal of Chemical Physics, 155 (12).

del Razo, Mauricio J. and Frömberg, Daniela and Straube, Arthur V. and Schütte, Christof and Höfling, Felix and Winkelmann, Stefanie (2022) A probabilistic framework for particle-based reaction–diffusion dynamics using classical Fock space representations. Letters in Mathematical Physics, 112 (49).

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Eigel, Martin and Gruhlke, Robert and Sommer, David (2024) Less interaction with forward models in Langevin dynamics: Enrichment and Homotopy Martin , Robert , David. arXiv To appear in SIADS . (Submitted)

Eiter, Thomas and Hopf, Katharina and Mielke, Alexander (2021) Leray–Hopf solutions to a viscoelastoplastic fluid model with nonsmooth stress–strain relation. Nonlinear Analysis, 65 .

Elliott, C.M. and Gräser, C. and Hobbs, G. and Kornhuber, R. and Wolf, M.W. (2016) A Variational Approach to Particles in Lipid Membranes. Archive for Rational Mechanics and Analysis, 222 (2). pp. 1011-1075. ISSN Print: 0003-9527; Online:1432-0673

Enciso, M. and Schütte, Ch. and Delle Site, L. (2015) Influence of pH and sequence in peptide aggregation via molecular simulation. Journal of Chemical Physics, 143 (24). p. 243130. ISSN 0021-9606

Engel, Maximilian and Gottwald, Georg A. (2023) Canards in modified equations for Euler discretizations. Preprint to appear in Contemporary Mathematics . (In Press)

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Futterer, B. and Koch, S. and Dahley, N. and von Larcher, T. and Scurtu, N. and Jehring, L. and Egbers, C. (2007) Das GeoFlow-Experiment auf der ISS: Interferogrammauswertung für die thermische Konvektion im Kugelspalt. In: Lasermethoden in der Strömungsmesstechnik. Proceedings zur 15. GALA-Fachtagung . Universität Rostock, Rostock. ISBN 978-3-86009-007-7

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Garbuno-Inigo, Alfredo and Nüsken, Nikolas and Reich, Sebastian (2020) Affine Invariant Interacting Langevin Dynamics for Bayesian Inference. SIAM J. APPLIED DYNAMICAL SYSTEMS, 19 (3). pp. 1633-1658.

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Gelß, P. and Matera, S. and Klein, R. and Schmidt, B. (2023) Quantum Dynamics of Coupled Excitons and Phonons in Chain-Like Systems: Tensor Train Approaches and Higher-Order Propagators. J. Chem. Phys. . (Submitted)

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Gholami, A. and Klein, R. and Delle Site, L. (2022) Simulation of a particle domain in a continuum/fluctuating hydrodynamics reservoir. Phys. Rev. Lett., 129 (23).

Gholami, Abbas and Klein, R. and Delle Site, Luigi (2021) On the relation between Pressure and Coupling Potential in Adaptive Resolution Simulations of Open Systems in contact with a Reservoir. Advanced Theory and Simulations, 5 . pp. 1-8.

Gholami, Abbas and Klein, R. and Delle Site, Luigi (2022) Simulation of a Particle Domain in a Continuum, Fluctuating Hydrodynamics Reservoir. Physical Review Letters, 129 (23).

Ghysbrecht, Simon and Keller, Bettina G. (2024) Thermal isomerization rates in retinal analogues using Ab-Initio molecular dynamics. Journal of Computational Chemistry, 45 (16). pp. 1317-1427.

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Gokhale, N. and Nikiforakis, N. and Klein, R. (2018) A dimensionally split Cartesian cut cell method for hyperbolic conservation laws. Journal of Computational Physics, 364 . pp. 186-208. ISSN 0021-9991

Gokhale, N. and Nikiforakis, N. and Klein, R. (2018) A dimensionally split Cartesian cut cell method for the compressible Navier-Stokes equations. Journal of Computational Physics, 375 . pp. 1205-1219.

Gonçalves, Patrícia and Kern, Julian and Xu, Lu (2024) A novel approach to hydrodynamics for long-range generalized exclusion. arXiv . (Unpublished)

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Gray, J. and Vinkeloe, J. and Berndt, P. and Moeck, J. and Paschereit, O. C. and Klein, R. and Stathopoulos, P. (2016) Thermodynamic Evaluation of Pulse Detonation Combustion for Gas Turbine Power Cycles. In: Turbo Expo Turbomachinery Technical Conference & Exposition, June 13 – 17, 2016, COEX Convention Center, SEOUL SOUTH KOREA.

Grosu, C. and Panosetti, C. and Merz, S. and Jakes, P. and Matera, S. and Eichel, R.A. and Granwehr, J. and Scheurer, C. (2023) Revisiting the storage capacity limit of graphite battery anodes: spontaneous lithium overintercalation at ambient pressure. PRX Energy, 2 .

Gruhlke, Robert and Nouy, Anthony and Trunschke, Philipp (2024) Optimal sampling for stochastic and natural gradient descent Robert Gruhlke, ,. arXiv . (Submitted)

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Gräser, C. and Kornhuber, R. and Sack, U. (2015) Nonsmooth Schur-Newton methods for multicomponent Cahn-Hilliard systems. IMA Journal of Numerical Analysis, 35 (2). pp. 652-679. ISSN 0272-4979

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Gräser, Carsten and Sander, Oliver (2019) Truncated Nonsmooth Newton Multigrid Methods for Block-Separable Minimization Problems. IMA Journal of Numerical Analysis, 39 (1). pp. 454-481. ISSN 0272-4979

Gussmann, Pascal and Mielke, Alexander (2020) Linearized elasticity as Mosco-limit of finite elasticity in the presence of cracks. Advances in Calculus of Variations, 13 (1). pp. 1-20.

Guth, Philipp A. and Kaarnioja, Vesa (2024) Application of dimension truncation error analysis to high-dimensional function approximation To appear in: 2022. Springer Verlag, 2024. In: Monte Carlo and Quasi-Monte Carlo Methods. Springer Verlag. (Submitted)

Guth, Philipp A. and Kaarnioja, Vesa (2024) Generalized dimension truncation error analysis for high-dimensional numerical integration: lognormal setting and beyond. to appear in SIAM Journal on Numerical Analysis . (Submitted)

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Guth, Philipp A. and Kaarnioja, Vesa and Kuo, Frances Y. and Schillings, Claudia and Sloan, Ian H. (2021) A Quasi-Monte Carlo Method for Optimal Control Under Uncertainty. SIAM/ASA Journal on Uncertainty Quantification, 9 (2). pp. 354-383.

Guth, Philipp A. and Kaarnioja, Vesa and Kuo, Frances Y. and Schillings, Claudia and Sloan, Ian H. (2019) A quasi-Monte Carlo method for an optimal control problem under uncertainty. ArXiv .

Guth, Philipp A. and Kaarnioja, Vesa and Kuo, Frances Y. and Sloan, Ian H. (2022) Parabolic PDE-constrained optimal control under uncertainty with entropic risk measure using quasi-Monte Carlo integration. arXiv preprint arXiv:2208.02767 . (Submitted)

Guth, Philipp A. and Schillings, Claudia and Weissmann, Simon (2020) Ensemble Kalman filter for neural network based one-shot inversion. . . (Submitted)

Guth, Philipp A. and Schillings, Claudia and Weissmann, Simon (2020) Ensemble Kalman filter for neural network-based one-shot inversion. ArXiv . (Submitted)

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Haghdoost, M.R. and Edgington-Mitchell, D. and Nadolski, M. and Klein, R. and Oberleithner, K. (2020) Dynamic Evolution of a Transient Supersonic Trailing Jet Induced by a Strong Incident Shock Wave. Phys. Rev. Fluids, 5 (7).

Haghdoost, M.R. and Thethy, B.S. and Nadolski, M. and Klein, R. and Honnery, D. and Hennington- Mitchell, D. and Seo, B. and Oberleithner, K. and Paschereit, O. (2020) Evaluation of Shock Dividers using Numerical and Experimental Methods. In: AIAA SciTech.

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Hajian, Soheil and Hintermüller, Michael and Schillings, Claudia and Strogtes, Michael (2018) A Bayesian approach to parameter identification in gas networks. Preprint : Weierstraß-Institut für Angewandte Analysis und Stochastik, 2537 .

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Hanu, Matei and Hesser, Jürgen and Kanschat, Guido and Moviglia, Javier and Schillings, Claudia and Stallkamp, Jan (2023) Ensemble Kalman Inversion for Image Guided Guide Wire Navigation in Vascular Systems. arXiv . (Submitted)

Hanu, Matei and Latz, J. and Schillings, Claudia (2023) Subsampling in ensemble Kalman inversion. Inverse Problems, 39 (9).

Hanu, Matei and Weissmann, Simon (2023) On the ensemble Kalman inversion under inequality constraints. arXiv . (Submitted)

Harikrishnan, A. P. and Ansorge, C. and Klein, R. and Vercauteren, N. (2023) Geometry and organization of coherent structures in stably stratified atmospheric boundary layers. Journal of Fluid Mechanics . (Submitted)

Harikrishnan, A. P. and Ansorge, C. and Klein, R. and Vercauteren, N. (2021) Lagrangian hairpins in atmospheric boundary layers. Gallery of Fluid Motion .

Harikrishnan, A. P. and Ansorge, C. and Klein, R. and Vercauteren, N. (2020) The curious nature of hairpin vortices. Gallery of Fluid Motion. In: 73th Annual Meeting of the APS Division of Fluid Dynamics, November 22, 2020 — November 24, 2020, Chicago, IL Virtual.

Harikrishnan, A. P. and Rodal, M. and Klein, R. and Margerit, D, and Vercauteren, N. (2023) On the motion of hair-pin filaments in the atmospheric boundary layer. Physics of Fluids, 35 (7).

Harlander, U. and Faulwetter, R. and Alexandrov, K. and Egbers, C. (2009) Estimating local instabilities from data with application to geophysical flows. Advances in Turbulence XII, 132 . Springer, Proceedings in Physics.

Harlander, U. and Ridderinkhof, H. and Schouten, M.W. and de Ruijter, W. P. M (2009) Long-term observations of transport, eddies, and Rossby waves in the Mozambique Channel. JOURNAL OF GEOPHYSICAL RESEARCH, 114 (C02003). 15pp.

Harlander, U. and Wentzel, J. and Alexandrov, K. and Wang, Y. and Egbers, C. (2011) PIV- and LDV-measurements of baroclinic wave interactions in a thermally driven rotating annulus. Experiments in Fluids . (Submitted)

Harlander, U. and von Larcher, T. and Wang, Y. and Egbers, C. (2009) PIV- and LDV-measurements of baroclinic wave interactions in a thermally driven rotating annulus. In: EULAG workshop, October 7, 2008, Bad Tölz.

Harlander, U. and von Larcher, T. and Wang, Y. and Egbers, C. (2011) PIV- and LDV-measurements of baroclinic wave interactions in a thermally driven rotating annulus. Experiments in Fluids, 51 (1). pp. 37-49.

Harlander, U. and von Larcher, T. and Wang, Y. and Egbers, C. (2008) The heated rotating annulus: PIV- and LDV-measurements of multiple-scale interactions in quasi-turbulent flows. In: 14th International Symposium on Application of Laser Techniques to Fluid Mechanics, Lisbon, Portugal.

Harlander, U. and von Larcher, T. and Wright, G.B. and Hoff, M. and Alexandrov, K. and Egbers, C. (2014) Orthogonal decomposition methods to analyze PIV, LDA and thermography data of a thermally driven rotating annulus laboratory experiment. In: AGU Book Modelling Atmospheric and Oceanic flows: insights from laboratory experiments and numerical simulations. .. (Submitted)

Harlander, U. and von Larcher, T. and Wright, G.B. and Hoff, M. and Alexandrov, K. and Egbers, C. (2015) Orthogonal decomposition methods to analyze PIV, LDA and thermography data of a thermally driven rotating annulus laboratory experiment. American Geophysical Union. ISBN 978-1-118-85593-5

Hartmann, C. and Delle Site, L. (2015) Scale Bridging in Molecular Simulation. The European Physical Journal Special Topics, 224 (12). pp. 2173-2176. ISSN 1951-6355

Hartmann, C. (2011) Balanced model reduction of partially-observed Langevin processes: an averaging principle. Math. Comput. Model. Dyn. Syst., 17 (5). pp. 463-490.

Hartmann, C. (2008) Structure-preserving model reduction of partially observed differential equations: molecular dynamics and beyond. Oberwolfach Reports, 5 (2). pp. 1111-1115.

Hartmann, C. and Latorre, J.C. (2011) Computing free energy differences using conditioned diffusions. AIP Conf. Proc., 1332 (1). pp. 218-220.

Hartmann, C. and Latorre, J.C. and Pavliotis, G. A. and Zhang, W. (2014) Optimal control of multiscale systems using reduced-order models. J. Computational Dynamics, 1 (2). pp. 279-306. ISSN 2158-2505

Hartmann, C. and Neureither, L. and Sharma, U. (2020) Coarse-graining of non-reversible stochastic differential equations: quantitative results and connections to averaging. SIAM Journal on Mathematical Analysis, 52 (3). pp. 2689-2733.

Hartmann, C. and Richter, L. (2021) Nonasymptotic bounds for suboptimal importance sampling. To appear 2024 in SIAM/ASA Journal on Uncertainty Quantification . (In Press)

Hartmann, C. and Richter, L. and Schütte, Ch. and Zhang, W. (2017) Variational characterization of free energy: theory and algorithms. Entropy (Special Issue), 19 (11). pp. 1-27. ISSN 1099-4300

Hartmann, C. and Schäfer-Bung, B. and Thöns-Zueva, A. (2013) Balanced averaging of bilinear systems with applications to stochastic control. SIAM J. Control Optim., 51 (3). pp. 2356-2378.

Hartmann, C. and Schütte, Ch. and Zhang, W. (2019) Jarzysnki equality, fluctuation theorems and variance reduction: Mathematical analysis and numerical algorithms. J. Stat. Phys., 175 (6). pp. 1214-1261. ISSN 0022-4715; ESSN: 1572-9613

Hartmann, C. and Schütte, Ch. and Zhang, W. (2016) Model reduction algorithms for optimal control and importance sampling of diffusions. Nonlinearity, 29 (8). pp. 2298-2326. ISSN 0951-7715

Hartmann, C. and Yanao, Tomohiro (2013) The falling cat problem and shape effects in small molecules in a random environment: a case study. Molecular Physics, 111 (22-23). pp. 3534-3545. ISSN 0026-8976

Hartmann, Carsten and Jöster, Annika (2024) Risk-neutral limit of adaptive importance sampling of random stopping times. Submitted to 26th International Symposium on Mathematical Theory of Networks and Systems . (Submitted)

Hartmann, Carsten and Kebiri, Omar and Neureither, Lara and Richter, Lorenz (2019) Variational approach to rare event simulation using least-squares regression. Chaos, 29 (6). ISSN 1054-1500 (print); 1089-7682 (online)

Hartmann, Carsten and Neureither, Lara and Sharma, Upanshu (2020) Coarse-graining of non-reversible stochasticdifferential equations: quantitative results and connections to averaging. SIAM Journal on Numerical Analysis, 52 (3). pp. 2689-2733. ISSN 0036-1429

Hartmann, Carsten and Neureither, Lara and Stehlau, Markus (2021) Reachability Analysis of Randomly Perturbed Hamiltonian Systems. IFAC-PapersOnLine, 54 (19). pp. 307-3014.

Hassan, Irtaza and Ferraro, Federica and Imhof, Petra (2021) Effect of the Hydration Shell on the Carbonyl Vibration in the Ala-Leu-Ala-Leu Peptide. Molecules 2021, 26 (8). pp. 1-24.

Hastermann, G. and Reinhardt, M. and Klein, R. and Reich, S. (2021) Balanced data assimilation for highly-oscillatory mechanical systems. Communications in Applied Mathematics & Computational Science, 16 (1). pp. 119-154.

Haug, Ø. T. and Rosenau, M. and Rudolf, M. and Leever, K. (2021) Short communication: Runout of rock avalanches limited by basal friction but controlled by fragmentation. Earth Surface Dynamics, 9 (3). pp. 665-672.

Haug, Ø. T. and Rosenau, M. and Rudolf, M. and Leever, K. and Oncken, O. (2020) Variations in runout of rock avalanches controlled by fragmentation, not basal friction. EarthArXiv . pp. 1-11.

Heida, M. (2018) Convergences of the squareroot approximation scheme to the Fokker–Planck operator. Mathematical Models and Methods in Applied Sciences, 28 (13). pp. 2599-2635. ISSN 0218-2025, ESSN: 1793-6314

Heida, M. (2017) Stochastic homogenization of rate-independent systems and applications. Continuum Mech. Thermodyn., 29 (3). pp. 853-894. ISSN 1432-0959 (online) 0935-1175 (print)

Heida, M. and Kornhuber, R. and Podlesny, J. (2020) Fractal homogenization of multiscale interface problems. Multiscale Modeling & Simulation, 18 (1). pp. 294-314. ISSN 1540-3459

Heida, M. and Mielke, A. (2017) Averaging of time-periodic dissipation potentials in rate-independent processes. Discrete and Continuous Dynamical Systems - Series S, 10 (6). pp. 1303-1327.

Heida, M. and Nesenenko, S. (2019) Stochastic homogenization of rate-dependent models of monotone type in plasticity. Asymptotic Analysis, 112 (3-4). pp. 185-212. ISSN 0921-7134

Heida, M. and Neukamm, S. and Varga, M. (2017) Stochastic unfolding and homogenization. SFB 1114 Preprint at WIAS 12/2017 . pp. 1-45. (Unpublished)

Heida, Martin and Kantner, Markus and Stephan, Artur (2021) Consistency and convergence for a family of finite volume discretizations of the Fokker--Planck operator. ESAIM: Mathematical Modelling and Numerical Analysis, 55 . pp. 3017-3042.

Heida, Martin and Neukamm, Stefan and Varga, Mario (2021) STOCHASTIC HOMOGENIZATION OF L-CONVEX GRADIENT FLOWS. Discrete and Continuous Dynamical Systems - S, 14 (1). pp. 1-27.

Heida, Martin and Neukamm, Stefan and Varga, Mario (2021) Stochastic homogenization of Λ-convex gradient flows. DISCRETE AND CONTINUOUS DYNAMICAL SYSTEMS SERIES S, 14 (1). pp. 427-459.

Heida, Martin and Patterson, Robert I. A. and Renger, Michiel D.R. (2019) Topologies and measures on the space of functions of bounded variation taking values in a Banach or metric space. Journal of Evolution Equations, 19 (1). pp. 111-152.

Heida, Martin and Röger, Matthias (2018) Large deviation principle for a stochastic Allen--Cahn equation. Journal of Theoretical Probability 31(1), 31 (1). pp. 1-18. (Submitted)

Heida, Martin and Thomas, Marita (2021) GENERIC for dissipative solids with bulk-interface interaction. wias preprint . pp. 1-27. ISSN 2198-5855 (Submitted)

Helfmann, L. and Djurdjevac Conrad, N. and Djurdjevac, A. and Winkelmann, S. and Schütte, Ch. (2021) From interacting agents to density-based modeling with stochastic PDEs. Commun. Appl. Math. Comput. Sci., 16 (1). pp. 1-32. ISSN Online: 2157-5452; Print: 1559-3940

Helfmann, Luzie and Ribera Borrell, Enric and Schütte, Christof and Koltai, Péter (2020) Extending Transition Path Theory: Periodically Driven and Finite-Time Dynamics. Journal of Nonlinear Science, 30 . pp. 3321-3366.

Helfmann, Luzie and Ribera Borrell, Enric and Schütte, Christof and Koltai, Péter (2020) Extending Transition Path Theory: Periodically Driven and Finite-Time Dynamics. Journal of Nonlinear Science . pp. 1-46. ISSN 1432-1467 (online)

Helling, Ch. and Klein, R. and Woitke, P. and Nowak, U. and Sedlmayr, E. (2004) Dust in brown dwarfs. IV. Dust formation and driven turbulence on mesoscopic scales. Astronomy and astrophysics, 423 (2). pp. 657-675. ISSN 0004-6361

Helling, Ch. and Oevermann, M. and Lüttke, M. J. H. and Klein, R. (2001) Dust in Brown Dwarfs I. Dust formation under turbulent conditions on microscopic scales. Astronomy & Astrophysics, - (), 376 . pp. 194-212.

Hempel, Tim and Elez, Katarina and Krüger, Nadine and Raich, Lluís and Shrimp, Jonathan H. and Danov, Olga and Jonigk, Danny and Braun, Arnim and Shen, Min and Hall, Matthew D. and Pöhlmann, Stefan and Hoffmann, Markus and Noé, Frank (2021) Synergistic inhibition of SARS-CoV-2 cell entry by otamixaban and covalent protease inhibitors: pre-clinical assessment of pharmacological and molecular properties. Chemical Science, 12 (38). pp. 12600-12609.

Henneke, F. and Lin, L. and Vorwerk, C. and Draxl, C. and Klein, R. and Yang, C. (2020) Fast Optical Absorption Spectra Calculations for Periodic Solid State Systems. Communications in Applied Mathematics and Computational Science, 15 (1). pp. 89-113.

Hertel, C. and Fröhlich, J. (2010) Error reduction in LES via adaptive moving grids. In: Quality and Reliability of Large-Eddy Simulations II QLES2009, 9-11 September 2009, Pisa (Italy). (Submitted)

Hertel, C. and Fröhlich, J. (2010) Large-Eddy Simulation with adaptive refinement for the flow over periodic hills. In: DLES8, 07.-09.07.2010, Eindhoven, Niederlande. (In Press)

Herter, Felix and Hege, Hans-Christian and Hadwiger, Markus and Lepper, Verena and Baum, Daniel (2021) Thin-Volume Visualization on Curved Domains. Computer Graphics forum, 40 (3). pp. 147-157.

Hertwig, D. and Bastigkeit, I. and Leitl, B. and Schatzmann, M. (2009) Detecting coherent flow structures within and above a simplified urban roughness. In: PHYSMOD 2009 - Proceedings of the Conference on Physical Modelling of Flow and Dispersion Phenomena. von Karman Institute for Fluid Dynamic. ISBN 978-2-930389-42-7

Hertwig, D. and Leitl, B. and Schatzmann, M. (2011) Organized turbulent structures –- Link between experimental data and LES. Journal of Wind Engineering and Industrial Aerodynamics, 99 (4). pp. 296-307. ISSN 01676105

Hertwig, D. and Leitl, B. and Schatzmann, M. (2010) Organized turbulent structures –- The link between experimental data and LES modeling. In: Fifth International Symposium on Computational Wind Engineering, May 23-27, 2010, Chapel Hill, North Carolina, USA. (Unpublished)

Heydecker, Daniel and Patterson, Robert I. A. (2019) Bilinear Coagulation Equations. SFB1114 Preprint in arxiv:1902.07686 . (Unpublished)

Hickel, S. and von Terzi, D.A. and Fröhlich, J. (2009) An adaptive local deconvolution method for general curvilinear coordinate systems. Springer Proceedings Physics - Advances in Turbulence XII, 132 (11). pp. 783-786.

Higgins, C. W. and Froidevaux, M. and Simeonov, V. and Vercauteren, N. and Barry, C. and Parlange, M. B. (2012) The Effect of Scale on the Applicability of Taylor's Frozen Turbulence Hypothesis in the Atmospheric Boundary Layer. Boundary-Layer Meteorology, 143 (2). 379 -391. ISSN Print: 0006-8314 Online: 1573-1472

Hiptmair, R. and Scarabosio, L. and Schillings, Claudia and Schwab, Ch. (2018) Large deformation shape uncertainty quantification in acoustic scattering. Advances in Computational Mathematics, 44 . pp. 1475-1518.

Hirt, M. and Craig, G.C. and Klein, R. (2023) Scale-interactions between the meso- and synoptic scales and the impact of diabatic heating. QJRMS, 149 (753). pp. 1319-1334.

Hirt, M. and Schielicke, L. and Müller, A. and Névir, P. (2017) Statistical and dynamical analyses of atmospheric blocking with an idealized point vortex model. Tellus A . pp. 1-22. (Submitted)

Hittmeir, S. and Klein, R. (2018) Asymptotics for moist deep convection I: Refined scalings and self-sustaining updrafts. Theoretical and Computational Fluid Dynamics, 32 (2). pp. 137-164. ISSN 0935-4964 (Print) 1432-2250 (Online)

Hittmeir, S. and Klein, R. and Li, J. and Titi, E. (2017) Global well-posedness for passively transported nonlinear moisture dynamics with phase changes. Nonlinearity, 30 (10). pp. 3676-3718. ISSN 0951-7715

Hittmeir, S. and Klein, R. and Li, J. and Titi, E. (2019) Global well-posedness for the primitive equations coupled to nonlinear moisture dynamics with phase changes. . . (Submitted)

Hittmeir, S. and Klein, R. and Li, J. and Titi, E. (2020) Global well-posedness for the primitive equations coupled to nonlinear moisture dynamics with phase changes. Nonlinearity, 33 (7). pp. 3206-3236.

Hittmeir, S. and Klein, R. and Li, J. and Titi, E. (2019) "Global well-posedness for the primitive equations coupled to nonlinear moisture dynamics with phase changes" by Hittmeir, Sabine; Klein, Rupert; Li, Jinkai; Titi, Edriss. Analysis of PDEs . pp. 1-28. ISSN 1907.11199 (Submitted)

Hittmeir, S. and Klein, R. and Li, J. and Titi, Edriss (2023) Global well-posedness for the thermodynamically refined passively transported nonlinear moisture dynamics with phase changes. Journal of Nonlinear Science, 33 (65). ISSN Online: 1432-1467 Print: 0938-8974

Hittmeir, S. and Klein, R. and Müller, A. and Névir, P. (2021) The Dynamic State Index with Moisture and Phase Changes. J. Math. Phys, 62 (12). pp. 1-12.

Hoffmann, M. and Fröhner, Chr. and Noé, F. (2019) ReaDDy 2: Fast and flexible software framework for interacting-particle reaction dynamics. PLoS Computational Biology, 15 (2). e1006830. ISSN 1553-7358

Hoffmann, M. and Fröhner, Chr. and Noé, F. (2019) Reactive SINDy: Discovering governing reactions from concentration data. J. Chem. Phys., 150 (2). 025101. ISSN 0021-9606, ESSN: 1089-7690

Hoffmann, M. J. and Engelmann, F. and Matera, S. (2017) A practical approach to the sensitivity analysis for kinetic Monte Carlo simulation of heterogeneous catalysis. The Journal of Chemical Physics, 146 (044118). ISSN 00219606

Hoffmann, M. J. and Matera, S. and Reuter, K. (2014) kmos: A lattice kinetic Monte Carlo framework. Computer Physics Communications, 185 (7). pp. 2138-2150.

Hoffmann, Moritz and Scherer, Martin and Hempel, Tim and Mardt, Andreas and de Silva, Brian and Husic, Brooke E. and Klus, Stefan and Wu, Hao and Kutz, Nathan and Brunton, Steven L (2021) Deeptime: a Python library for machine learning dynamical models from time series data. Mach. Learn.: Sci. Technol. 3 (2022), 3 (015009). pp. 1-28.

Hoffmann, Waldemar and Folmert, Kristin and Moschner, Johann and Xing Huang, Xing Huang and von Berlepsch, Hans and Koksch, Beate and Bowers, Michael T. and von Helden, Gert and Pagel, Kevin (2018) NFGAIL Amyloid Oligomers: The Onset of Beta-Sheet Formation and the Mechanism for Fibril Formation. J. Am. Chem. Soc. 2018, 140, 244−249, 140 . pp. 244-249.

Hofmeister, S. and Lindenau, J. and Mischau, A. and Ransiek, A. and Solga, H. (2021) Erste Befunde aus dem Projekt "MATH+ as a Research Object": Karriereziele, -wissen und -handeln, Nachwuchsförderung und Rekrutierung. Working Paper. Wissenschaftszentrum Berlin für Sozialforschung (WZB), Berlin, Berlin.

Horenko, I. (2009) On robust estimation of low-frequency variability trends in discrete Markovian sequences of atmospherical circulation patterns. The Journal of Atmospherical Sciences, 66 (7). 2059-2072 .

Horenko, I. (2009) On structure-preserving persistent clustering of multivariate time series. Journal of Computational Physics . (Submitted)

Horenko, I. (2010) Parameter identification in nonstationary Markov chains with external impact and its application to computational sociology. Multiscale Modeling & Simulation . (Submitted)

Horenko, I. (2020) On a Scalable Entropic Breaching of the Overtting Barrier for Small Data Problems in Machine Learning. Neural Computation, 32 (8). pp. 1563-1579.

Horenko, I. (2008) On robust estimation of low-frequency variability trends in discrete Markovian sequences of atmospheric circulation patterns. J. Atm. Sci. . (In Press)

Horenko, I. (2010) On the identification of non-stationary factor models and their application to atmospherical data analysis. J. Atm. Sci., 67 (5). pp. 1559-1574.

Horenko, I. and Gerber, S. (2015) Improving clustering by imposing network information. Science Advances, 1 (7). ISSN 2375-2548

Horenko, I. and Gerber, S. and O'Kane, T.J. and Risbey, J.S. and Monselesan, D.P. (2017) On inference and validation of causality relations in climate teleconnections. In: Nonlinear and Stochastic Climate Dynamics. Cambridge University Press, pp. 184-208. ISBN 9781107118140

Huang, W. and Kamenski, L. and Lang, J. (2010) A new anisotropic mesh adaption method based upon hierarchical a posteriori error estimates. J. Comput. Phys., 229 . pp. 2179-2198.

Huber, Konstantin and John, Timm and Vrijmoed, Johannes C. and Pleuger, Jan and Zhong, Xin (2024) Pulsed fluid release from subducting slabs caused by a scale-invariant dehydration process. Earth and Planetary Science Letters, 644 .

Huber, Konstantin and Vrijmoed, Johannes and John, Timm (2021) Formation of olivine-rich veins by reactive fluid flow in a dehydrating serpentinite. Earth and Space Science Open Archive . pp. 1-18.

Husic, Brooke E. and Charron, Nicholas E. and Lemm, Dominik and Wang, Jiang and Pérez, Adrià and Majewski, Maciej and Krämer, Andreas and Chen, Yaoyi and Olsson, Simon and de Fabritiis, Gianni and Noé, Frank and Clementi, Cecilia (2020) Coarse graining molecular dynamics with graph neural networks. J. Chem. Phys., 153 (194101). pp. 1-17.

Huysmans, Lucas and Titi, Edriss (2023) Non-Uniqueness and Inadmissibility of the Vanishing Viscosity Limit of the Passive Scalar Transport Equation. arXiv . (Unpublished)

Höfling, F. and Dietrich, S. (2020) Finite-size corrections for the static structure factor of a liquid slab with open boundaries. Journal of Chemical Physics, 153 (5). pp. 1-13.

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Ionescu, C. and Klein, R.J.T. and Hinkel, J., and Kavi Kumar, K.S., and Klein, R. (2009) Towards a formal framework for vulnerability to climate change. Environmental Modeling and Assessment, 14 (1). pp. 1-16. ISSN 1420-2026 (Print) 1573-2967 (Online)

Iravani, Sahar and Conrad, T. O. F. (2021) An Interpretable Deep Learning Approach for Biomarker Detection in LC-MS Proteomics Data. IEEE/ACM Transactions on Computational Biology and Bioinformatics, 20 (1). ISSN 1545-4963

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Jasor, G. and Wacker, U. and Beheng, K.D. and Polifke, W. (2014) Modeling artifacts in the simulation of the sedimentation of raindrops with a Quadrature Method of Moments. Meteorologische Zeitschrift, 23 (4). pp. 369-385.

Jebens, .S. and Knoth, O. and Arnold, M. and Weiner, R. (2010) Linearly implicit peer methods for the compressible Euler equations. Applied Numerical Mathematics . (Submitted)

Jebens, .S. and Knoth, O. and Weiner, R. (2011) Partially Implicit PeerMethods for the Compressible Euler Equations. Journal of Computational Physics . (Submitted)

Jebens, S. and Knoth, O. and Weiner, R. (2009) Explicit Two-Step Peer Methods for the Compressible Euler Equations. Monthly Weather Review, 137 (7). pp. 2380-2392.

Jeschke, A. and Pedersen, G.K. and Vater, S. and Behrens, J. (2017) Depth‐averaged non‐hydrostatic extension for shallow water equations with quadratic vertical pressure profile: equivalence to Boussinesq‐type equations. International Journal for Numerical Methods in Fluids, 84 (109710). pp. 569-583. ISSN 1097-0363

Jeschke, A. and Vater, S. and Behrens, J. (2017) A Discontinuous Galerkin Method for Non-hydrostatic Shallow Water Flows. In: Finite Volumes for Complex Applications VIII -- Hyperbolic, Elliptic and Parabolic Problems. Springer, pp. 247-255. ISBN Print: 978-3-319-57393-9 Online: 978-3-319-57394-6

Jiménez, C. and Schmidt, H. (2009) Numerical simulation of the response of planar flames to acoustic waves. In: Tercera Reunión de la Sección Española del Instituto de Combustión , 21.-22.Mai 2009, Valladolid, Spain. (Unpublished)

Jiménez, C. and Schmidt, H. (2009) Unsteady response of premixed flames to acoustic pressure pulses under variation of the complexity of the reaction mechanism. In: Fourth European Combustion Meeting (ECM2009), 14 - 17 April 2009, Vienna, Austria. (Unpublished)

John, V. and Schmeyer, E. (2008) Finite element methods for time-dependent convection-diffusion-reaction equations with small diffusion. Computer methods in applied mechanics and engineering, 198 (3). pp. 475-494. ISSN 0045-7825

John, V. and Schmeyer, E. (2008) On finite element methods for 3D time-dependent convection-diffusion-reaction equations with small diffusion. In: BAIL 2008 - Boundary and Interior Layers. Lecture Notes in Computational Science and Engineering, 69 . Springer Verlag, ISSN:1439-7358, pp. 173-181. ISBN 978-3-642-00604-3 (Print) 978-3-642-00605-0 (Online)

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John, David N. and Stohrer, Livia and Schillings, Claudia and Schick, Michael and Heuveline, Vincent (2021) Hierarchical surrogate-based Approximate Bayesian Computation for an electric motor test bench. . . (Submitted)

Jong-Bolm, Daniëlle de and Sadeghi, Mohsen and Bogaciu, Cristian A. and Bao, Guobin and Klaehn, Gabriele and Hoff, Merle and Mittelmeier, Lucas and Basmanav, F. Buket and Noé, Frank and Rizzoli, Silvio O. (2023) Protein nanobarcodes enable single-step multiplexed fluorescence imaging. PLOS BIOLOGY, 21 (12).

Jung, S. and Schwedhelm, J.C. and Schillings, Claudia and Keuper, M. (2023) Happy People--Image Synthesis as Black-Box Optimization Problem in the Discrete Latent Space of Deep Generative Models. arXiv . (Submitted)

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KORNHUBER, RALF and PODLESNY, JOSCHA and YSERENTANT, HARRY (2020) NUMERICAL HOMOGENIZATION OF FRACTAL INTERFACE PROBLEMS. arXive . pp. 1-30. (Submitted)

Kaarnioja, Vesa and Kuo, Frances Y. and Sloan, Ian H. (2024) Lattice-based kernel approximation and serendipitous weights for parametric PDEs in very high dimensions. In: Monte Carlo and Quasi-Monte Carlo Methods 2022. Springer Verlag. (Submitted)

Kaarnioja, Vesa and Rupp, Andreas (2024) Quasi-Monte Carlo and discontinuous Galerkin. arXiv . (Submitted)

Kaatz, L. and Schmalholz, Stefan M. and John, T. (2023) Numerical Simulations Reproduce Field Observations Showing Transient Weakening During Shear Zone Formation by Diffusional Hydrogen Influx and H2O Inflow. Geochemistry, Geophysics, Geosystems, 24 (5).

Kaatz, Lisa and Zertani, Sascha and Moulas, Evangelos and John, Timm and Labrousse, Loïc and Schmalholz, Stefan M. and Andersen, Torgeir B. (2021) Widening of Hydrous Shear Zones During Incipient Eclogitization of Metastable Dry and Rigid Lower Crust— Holsnøy, Western Norway. Tectonics, 40 (3). pp. 1-19. ISSN 1944-9194

Kadioglu, S.Y. and Minion, M.L. and Klein, R. (2008) A Fourth-Order Auxiliary Variable Projection Method for Zero-Mach Number Gas Dynamics. Journal of Computational Physics , 227 (3). 2012-2043 .

Kaiser, A. (2019) Data-driven approaches to study the dynamical stability of the stably stratified boundary layer. Masters thesis, TU Berlin.

Kaiser, A. (2019) Stably Stratified Atmospheric Boundary Layers: Event Detection and Classification for Turbulent Time Series. Other thesis, Freie Universität Berlin.

Kaiser, A. and Faranda, D. and Krumscheid, S. and Belušić, D. and Vercauteren, N. (2020) Detecting regime transitions of the nocturnal and Polar near-surface temperature inversion. Journal of the Atmospheric Sciences . ISSN 0022-4928; eISSN: 1520-0469

Kanda, M. and Inagaki, A. and Miyamoto, T. and Gryschka, M. and Raasch, S. (2013) A New Aerodynamic Parameterization for Real Urban Surfaces. Boundary-Layer Meteorology, 148 . pp. 357-377.

Kappler, J. and Daldrop, J.O. and Brünig, F.N. and Boehle, M.D. and Netz, R.R. (2018) Memory-induced acceleration and slowdown of barrier crossing. J. Chem. Phys., 148 (1). 014903.

Kappler, J. and Noé, F. and Netz, R.R. (2018) Cyclization dynamics of finite-length collapsed self-avoiding polymers. SFB 1114 Preprint 02/2018 . (Unpublished)

Kappler, Julian and Hinrichsen, Victor B. and Netz, Roland R. (2019) Non-Markovian barrier crossing with two-time-scale memory is dominated by the faster memory component. The European Physical Journal E, 42 (119). ISSN 1292-8941

Kappler, Julian and Noé, Frank and Netz, Roland R. (2019) Cyclization and Relaxation Dynamics of Finite-Length Collapsed Self-Avoiding Polymers. Physical Review Letters, 122 .

Kavokine, Nikita and Netz, Roland R. and Bocquet, Lydéric (2021) Fluids at the Nanoscale: From Continuum to Subcontinuum Transport. Annual Reviews of Fluid Mechanics, 53 . pp. 377-410.

Kebiri, O. and Neureither, L. and Hartmann, C. (2018) Singularly perturbed forward-backward stochastic differential equations: application to the optimal control of bilinear systems. Computation, 6 (3). p. 41. ISSN 2079-3197 (online)

Kebiri, Omar and Neureither, Lara and Hartmann, Carsten (2019) Adaptive importance sampling with forward-backward stochastic differential equations. In: Stochastic Dynamics Out of Equilibrium. Springer Proceedings in Mathematics & Statistics, 282 . Springer International Publishing, pp. 265-281. ISBN 978-3-030-15095-2

Keller, B.G. and Aleksic, S. and Donati, L. (2019) Markov State Models in drug design. In: Biomolecular Simulations in Structure-based Drug Discovery. Methods and Principles in Medicinal Chemistry, 75 . Wiley-Interscience, Weinheim, pp. 67-86. ISBN 978-3-527-34265-5

Keller, Bettina G. and Bolhuis, Peter G. (2024) Dynamical Reweighting for Biased Rare Event Simulations. Annual Review of Physical Chemistry, 75 (1). pp. 137-162.

Kern, Julian (2023) Exponential equivalence for misanthrope processes in contact with weak reservoirs and applications to totally asymmetric exclusion processes. Preprint . (Unpublished)

Kern, Julian (2023) Skorokhod topologies: What they are and why we should care. Mathematische Semesterberichte .

Kern, Julian and Wiederhold, Bastian (2024) A Λ-Fleming-Viot type model with intrinsically varying population size. Electronic Journal of Probability, 29 (125).

Kiefer, Henrik and Dalton, Benjamin and Bruenig, Florian N. and Netz, Roland R. (2022) Connection between Macroscopic Hydrodynamics and Molecular Friction in Liquids. Preprint . pp. 1-26. (Unpublished)

Kieninge, Stefanie and Donati, Luca and Keller, Bettina (2020) Dynamical reweighting methods for Markov models. Current Opinion in Structural Biology, 61 . pp. 124-131. ISSN 0959-440X

Kieninger, S. and Keller, B. (2021) Path probability ratios for Langevin dynamics—Exact and approximate. The Journal of Chemical Physics, 154 . pp. 1-21.

Kieninger, Stefanie and Keller, Bettina (2022) GROMACS Stochastic Dynamics and BAOAB Are Equivalent Configurational Sampling Algorithms. J. Chem. Theory Comput., 18 (10).

Kies, T. and Gräser, C. and Delle Site, L. and Kornhuber, R. (2020) Free energy computation of particles with membrane-mediated interactions via Langevin dynamics. arXiv:2009.14713 . pp. 1-20. (Submitted)

Kies, Tobias (2018) Gradient Methods for Membrane-Mediated Particle Interactions. PhD Thesis . pp. 1-147.

Kilian, S. and Münch, M. (2009) A new generalized domain decomposition strategy for the efficient parallel solution of the FDS-pressure equation. Part I: Theory, Concept and Implementation. ZIB-Report, 09-19 . 30 pages. ISSN 1438-0064

Kim, W.K. and Netz, R.R. (2015) The mean shape of transition and first-passage paths. J. Chem. Phys., 143 (224108).

Klein, R. (1995) Analysis of Accelerating Detonation Using Large Activation Energy Asymptotics. Journal de physique. IV , 5 (4). pp. 443-457. ISSN 1155-4339

Klein, R. (2015) Comments on "Adaptive Resolution Simulation in Equilibrium and Beyond" by H. Wang and A. Agarwal. The European Physical Journal, 224 (12). pp. 2497-2499.

Klein, R. (2015) Comments on "Advantages and challenges in coupling an ideal gas to atomistic models in adaptive resolution simulations" by K. Kreis, A.C. Fogarty, K. Kremer R. Potestio. The European Physical Journal, 224 (12). pp. 2503-2504. ISSN Online: 1951-6401 Print: 1951-6355

Klein, R. (2015) Comments on "Open Boundary Molecular Dynamics " by R. Delgado-Buscalioni, J. Sablic, and M. Praprotnik. The European Physical Journal, 224 (12). pp. 2509-2510. ISSN Online: 1951-6401 Print: 1951-6355

Klein, R. (1988) Detonation Initiation Due to Shock Wave-Boundary Interactions. Notes on Numerical Fluid Mechanics, 24 . 279-288..

Klein, R. (1985) Kumulative Effekte aufgrund schwacher Druckwellen bei der Kompression eines reagierenden Gasgemisches. PhD thesis, RWTH Aachen.

Klein, R. (1995) The Level-Set Approach to Premixed Turbulent Combustion in the Flamelet Regime: Theory and Numerical Implementation. Euroconference "Premixed Turbulent Combustion: Introduction to the State of the Art" .

Klein, R. (2005) Multiple spacial scales in engineering and atmospheric low Mach number flows. ESAIM: Mathematical Modelling and Numerical Analysis (M2AN), 39 . pp. 537-559. ISSN 0764-583X

Klein, R. (1999) Numerics in Combustion. In: Introduction to Turbulent Combustion. Lecture Series . von Karman Institute for Fluid Dynamics, Brussels, Belgium.

Klein, R. (1991) On the Dynamics of Weakly Curved Detonations. Institute for Mathematics and Its Applications, 35 . ISSN 0940-6573

Klein, R. (1991) On the Dynamics of Weakly Curved Detonations. IMA-Volumes in Mathematics and its Applications, 35 . ISSN 978-0-387-97583-2

Klein, R. (2010) On the regime of validity of sound-proof model equations for atmospheric flows. In: ECMWF, Non-hydrostatic Modelling Workshop, November 2010, Reading UK.

Klein, R. (2010) Scale-Dependent Asymptotic Models for Atmospheric Flows. Annual Review of Fluid Mechanics, 42 . pp. 249-274.

Klein, R. (1995) Semi-Implicit Extension of a Godunov-Type Scheme Based on Low Mach Number Asymptotics I: One-dimensional Flow,. Journal of Computational Physics, 121 (2). pp. 213-237. ISSN 0021-9991

Klein, R. (1988) Shock Initiated Ignition in an L-shaped Duct: Two Aspects of its Numerical Simulation. Notes on Numerical Fluid Mechanics, 20 . pp. 138-145.

Klein, R. (1988) Stoßinduzierte Zündung und der Übergang zur Detonation in engen Spalten. PhD thesis, RWTH Aachen.

Klein, R. (2006) Theoretical Developments in Tropical Meteorology. In: Theoretical and Computational Fluid Dynamics. Springer Verlag.

Klein, R. (2007) A Unified Approach to Meteorological Modelling based on Multiple Scales Asymptotics. In: European Geosciences Union, Vienna.

Klein, R. (2008) An Unified Approach to Meteorological Modelling Based on Multiple-Scales Asymptotics. Advances in Geosciences, 15 . pp. 23-33.

Klein, R. (1994) Zur Dynamik schlanker Wirbel. PhD thesis, RWTH Aachen.

Klein, R. and Aigner, H. (Hrsg) and Behrends, E. (Hrsg) (2009) Mathematik im Klima des globalen Wandels. In: Alles Mathematik. 3, überarb. Aufl. . Vieweg+Teubner, p. 241. ISBN 978-3-8348-0416-7

Klein, R. and Bates, K.R. and Nikiforakis, N. (2009) Well Balanced Compressible Cut-Cell Simulation of Atmospheric Flow. Philosophical Transaction of the Royal Society, 367 (1907). 4559-4575 . ISSN Online: 1471-2962

Klein, R. and Benacchio, T. (2016) A doubly blended model for multiscale atmospheric dynamics. Journal of the Atmospheric Sciences, 73 . pp. 1179-1186. ISSN Online: 1520-0469 Print: 0022-4928

Klein, R. and Benacchio, T. and O'Neill, W.P. (2014) Using the sound-proof limit for balanced data initialization. In: ECMWF Seminar on Numerical Methods for Atmosphere and Ocean Modelling, 2-5 September 2013, Reading, UK.

Klein, R. and Botta, N. and Owinoh, A.Z. (2001) Distinguished limits, multiple scales asymptotics, and numerics for atmospheric flows. In: 13th Conference on Atmospheric and Oceanic Fluid Dynamics, July 2001, American Meteorological Society, Breckenridge, Colorado.

Klein, R. and Botta, N. and Schneider, T. and Munz, C.D. and Roller, S. and Meister, A. and Hoffmann, L. and Sonar, T. (2001) Asymptotic adaptive methods for multi-scale problems in fluid mechanics. Journal of Engineering Mathematics, 39 (1). pp. 261-343. ISSN 0022-0833 (Print) 1573-2703 (Online)

Klein, R. and Breitbach, H. and Geratz, K. J. and Senger, W. (1994) Surface erosion by high-speed combustion waves. Symposium (International) on Combustion, 25 (1). 95-102 .

Klein, R. and Breitbach, H. and Terhoeven, P. and Munz, C.-D. and Roller, S. (1998) Numerical Techniques for Multi-Scale Weakly Compressible Reactive Flows. Technical Report. Vieweg, Numerical Flow Simulation I.

Klein, R. and Breitung, W. and Coe, I. and Grönig, H. and He, L. and Olivier, H. and Rehm, W. and Studer, E. and Vendel, J. (1998) Models and Criteria for Prediction of Deflagration-to-Detonation Transition(DDT) in Hydrogen-Air-Steam Systems under Severe Accident Conditions. In: Fission Safety (FISA 98), European Commission, 1998.

Klein, R. and Breitung, W. and Coe, I. and Grönig, H. and He, L. and Olivier, H. and Rehm, W. and Studer, E. and Vendel, J. (1999) Models and Criteria for Prediction of Deflagration-to-Detonation Transition(DDT) in Hydrogen-Air-Steam Systems under Severe Accident Conditions. In: Fission Safety (FISA 99), European Commission, 1999.

Klein, R. and Knio, O.M. (1995) Asymptotic Vorticity Structure and Numerical Simulation of Slender Vortex Filaments. Journal of Fluid Mechanics, 284 . pp. 275-321. ISSN 0022-1120

Klein, R. and Knio, O.M. and Ting, L. (1996) Representation of Core Dynamics in Slender Vortex Filament Simulations,. Physics of Fluids, 8 (9). 2415{-2425,.

Klein, R. and Lange, K. and Willems, W. and Munz, C.-D. (1994) Semi-Implicit High Resolution Schemes for Low Mach Number Flows. In: Proceedings of 5th International Conference on Hyperbolic Systems, June 1994, SUNY Stony Brook.

Klein, R. and Majda, A. J. (1993) An Asymptotic Theory for the Nonlinear Instability of Anti- Parallel Pairs of Vortex Filaments. Physics of Fluids A, 5 . pp. 369-379. ISSN 0899-8213

Klein, R. and Majda, A. J. (1991) Self-Stretching of a Perturbed Vortex Filament I: The Asymptotic Equation for Deviations from a Straight Line. Physica D, 49 (3). pp. 323-352.

Klein, R. and Majda, A. J. and Damodaran, K. (1995) Simplied Equations for the Interaction of Nearly Parallel 3-D Vortex Filaments,. Journal of Fluid Mechanics, 288 . 201-248 . ISSN 0022-1120

Klein, R. and Majda, A. J. and McLaughlin, R.M. (1992) Asymptotic Equations for the Stretching of Vortex Filaments by a Background Flow Field. Physics of Fluids A, 4 . pp. 2271-2281. ISSN 0899-8213

Klein, R. and Munz , C.-D. and Schmidt, L. (1990) A Numerical Study of Interfacial Instabilities at High Mach Numbers. Notes on Numerical Fluid Mechanics, 29,, 29 . 242-251.

Klein, R. and Münch, M. (2000) Models and Criteria for Prediction of Deflagration to Detonation Transition (DDT) in Hydrogen-Air-Steam Systems under Severe Accident Conditions. Numerical Techniques , 9, Reihe Energietechnik / Energy Technology. . pp. 83-102.

Klein, R. and Pauluis, O. (2012) Thermodynamic Consistency of a Pseudo-Incompressible Approximation for General Equations of State. Journal of the Atmospheric Sciences, 69 (3 ). pp. 961-968. ISSN Online: 1520-0469; Print : 0022-4928

Klein, R. and Peters, N. (1988) Cumulative Effects of Weak Pressure Waves During the Induction Period of a Thermal Explosion in a Closed Cylinder. J. Fluid Mech., 187 . pp. 197-230.

Klein, R. and Rehm, W. (2000) Models and Criteria for Prediction of Deflagration-to- Detonation Transition (DDT) in Hydrogen-Air-Steam Systems under Severe Accident Conditions. Schriften des Forschungszentrums Jülich, Energy Technology Series, 9 . ISSN ISBN 3-89336-258-4

Klein, R. and Schmidt, H. and Carqué, G. and Münch, M. and Oevermann, M. (2005) Mehrskalen-asymptotische Verfahren zur Kontrolle thermoakustischer Prozesse in Brennkammern. In: SFB 557, Teilprojekt B8, 17. März 2005, Berlin. (Unpublished)

Klein, R. and Stewart, D.S., (1993) The Relation between Curvature, Rate-State Dependence and Detonation Velocity. SIAM Journal on Applied Mathematics, 53 (5). 1401-1435 .

Klein, R. and Ting, L. (1995) Theoretical and Experimental Studies of Slender Vortex Filaments. Applied Mathematics Letters, 8 (2). pp. 45-50.

Klein, R. and Ting, L. (1992) Vortex Filaments with Axial Core Structure Variation. Appl. Math. Lett., 5 . pp. 99-103.

Klein, R. and Vater, S. and Paeschke, E. and Ruprecht, D. (2011) Multiple scales methods in meteorology. In: Asymptotic Methods in Fluid Mechanics: Survey and Recent Advances. CISM International Centre for Mechanical Sciences, 523 . Springer Verlag, pp. 127-196. ISBN 978-3-7091-0407-1

Klein, R. (2000) Asymptotic Analyses for Atmospheric Flows and the Construction of Asymptotically Adaptive Numerical Methods. ZAMM ·Zeitschrift für angewandte Mathematik und Mechanik, 80 (11-12). pp. 765-785. ISSN 0044-2267

Klein, R. (2009) Asymptotics, structure, and integration of sound-proof atmospheric flow equations. Theoretical and Computational Fluid Dynamics, 23 (3). pp. 161-195. ISSN 0935-4964 (Print) 1432-2250 (Online)

Klein, R. (2002) Numerical Methods for High and Low Speed Combustion Simulations. Numerical Methods for High and Low Speed Combustion Simulations. PDE's in models of superfluidity, superconductivity and reactive flows, Nato S (569). pp. 491-506.

Klein, R. (2017) Scale Analysis of Compressible Flows from an Application Perspective. In: Handbook of Mathematical Analysis in Mechanics of Viscous Fluids. Springer, pp. 1-42. ISBN 978-3-319-10151-4

Klein, R. and Achatz, U. and Bresch, D. and Knio, O.M. and Smolarkiewicz, P. (2010) Regime of Validity of Sound-Proof Atmospheric Flow Models. Journal of the Atmospheric Sciences, 67 (10). pp. 3226-3237. ISSN Online: 1520-0469 Print: 0022-4928

Klein, R. and Delle Site, Luigi (2022) Derivation of Liouville-like equations for the n-state probability density of an open system with thermalized particle reservoirs and its link to molecular simulation. Journal of Physics A: Mathematical and Theoretical, 55 . pp. 1-18.

Klein, R. and Majda, A. J. (2006) Systematic Multiscale Models for Deep Convection on Mesoscales. Theoretical and Computational Fluid Dynamics, 20 (5-6). pp. 525-551. ISSN 0935-4964 (Print) 1432-2250 (Online)

Klein, R. and Schielicke, L. and Pfahl, S. and Khouider, B. (2022) QG-DL-Ekman: Dynamics of a diabatic layer in the quasi-geostrophic framework. Journal of the Atmospheric Sciences, 79 (3). pp. 887-905.

Klein, R. and Schielicke, L. and Pfahl, S. and Khouider, B. (2021) QG-DL: Dynamics of a diabatic layer in the quasi-geostrophic framework. Journal of the Atmospheric Sciences . pp. 1-12. ISSN Online: 1520-0469 Print: 0022-4928 (Submitted)

Klein, R. and Ting, L. (1990) Far field velocity potential induced by a rapidly decaying vorticity distribution. Zeitschrift für Angewandte Mathematik und Physik (ZAMP), 41 (3). pp. 395-418. ISSN 0044-2275 (Print) 1420-9039 (Online)

Klein, R. and Viand, R. E. and Höfling, Felix and Delle Site, Luigi (2021) Nonequilibrium Induced by Reservoirs: Physico-Mathematical Models and Numerical Tests. Advanced Theory and Simulations, 4 . pp. 1-10.

Klimek, Anton and Netz, Roland R. (2022) Optimal non-Markovian composite search algorithms for spatially correlated targets. EPL A Letters Journal Exploring The Frontiers of Physics, 139 . pp. 1-8.

Klinkmüller, M. and Schreurs, G. and Rosenau, M. and Kemnitz, H. (2016) Properties of granular analogue materials: A community wide survey. Tectonophysics, 666 . pp. 23-38.

Klus, S. and Gelß, P. and Peitz, S. and Schütte, Ch. (2016) Tensor-based dynamic mode decomposition. SIAM Journal on Scientific Computing . ISSN ISSN 1064-8275 (print); 1095-7197 (electronic) (Submitted)

Klus, S. and Schütte, Ch. (2016) Towards tensor-based methods for the numerical approximation of the Perron-Frobenius and Koopman operator. Journal of Computational Dynamics . ISSN 2158-2491

Klus, S. and Koltai, P. and Schütte, Ch. (2016) On the numerical approximation of the Perron-Frobenius and Koopman operator. Journal of Computational Dynamics, 3 (1). pp. 51-79. ISSN 2158-2491

Klus, S. and Schuster, I. and Muandet, K. (2019) Eigendecompositions of Transfer Operators in Reproducing Kernel Hilbert Spaces. Journal of Nonlinear Science, 30 . pp. 283-315.

Klus, Stefan (2020) Data-driven analysis of complex dynamical systems. Refubium . pp. 1-174.

Klus, Stefan and Bittracher, Andreas and Schuster, Ingmar and Schütte, Christof (2018) A kernel-based approach to molecular conformation analysis. Journal of Chemical Physics, 149 (244109).

Klus, Stefan and Gelß, Patrick and Nüske, Feliks and Noé, Frank (2021) Symmetric and antisymmetric kernels for machine learning problems in quantum physics and chemistry. Machine Learning: Science and Technologie, 2 . pp. 1-23.

Klus, Stefan and Husic, Brooke E. and Mollenhauer, Mattes and Noé, Frank (2019) Kernel methods for detecting coherent structures in dynamical data. Chaos, 29 (12).

Klus, Stefan and Nüske, Feliks and Peitz, Sebastian and Niemann, Jan-Hendrik and Clementi, Cecilia and Schütte, Christof (2020) Data-driven approximation of the Koopman generator: Model reduction, system identification, and control. Physica D: Nonlinear Phenomena, 406 (132416).

Klus, Stefan and Nüske, Felix and Hamzi, Boumediene (2020) Kernel-Based Approximation of the Koopman Generator and Schrödinger Operator. entropy, 22 .

Knio, O.M. and Klein, R. (2000) Improved Thin Tube Methods for Slender Vortex Simulations. Journal of Computational Physics, 162 (1). 68-82(15).

Knio, O.M. and Ting, L. and Klein, R. (1998) Interaction of a Slender Vortex Filament with a Rigid Sphere: Dynamics and far-field noise. J. Acoustical Soc. of America, 103 (1). 83 -98. ISSN 0001-4966 (print)

Koltai, P. and Ciccotti, G. and Schütte, Ch. (2016) On metastability and Markov state models for non-stationary molecular dynamics. Journal of Chemical Physics, 145 (17). p. 174103.

Koltai, P. and Lie, Han Cheng and Plonka, M. (2019) Fréchet differentiable drift dependence of Perron--Frobenius and Koopman operators for non-deterministic dynamics. Nonlinearity, 32 (11). pp. 4232-4257. ISSN 0951-7715

Koltai, P. and Renger, M. (2018) From Large Deviations to Semidistances of Transport and Mixing: Coherence Analysis for Finite Lagrangian Data. Journal of Nonlinear Science, 28 (5). pp. 1915-1957. ISSN 1432-1467 (online)

Koltai, P. and Schütte, Ch. (2018) A multiscale perturbation expansion approach for Markov state modeling of non-stationary molecular dynamics. Multiscale Modeling and Simulation: A SIAM Interdisciplinary Journal, 16 (4). pp. 1455-1485. ISSN 1540-3459

Koltai, Péter and Kunde, Philipp (2024) A Koopman-Takens theorem: Linear least squares prediction of nonlinear time series. Preprint . (In Press)

Koltai, Péter and von Lindheim, Johannes and Neumayer, Sebastian and Steidl, Gabriele (2021) Transfer Operators from Optimal Transport Plans for Coherent Set Detection. Physica D: Nonlinear Phenomena, 426 . pp. 1-34.

Koreuber, M. and Mischau, A. (2018) Mathematik: Geschlechterforschung in disziplinären Zwischenräumen. In: Handbuch Interdisziplinäre Geschlechterforschung. Geschlecht und Gesellschaft. Springer Spektrum, pp. 719-728.

Koreuber, M. and Mischau, A. (2020) Mathematik: Geschlechterforschung in disziplinären Zwischenräumen. In: Handbuch Interdisziplinäre Geschlechterforschung. Geschlecht und Gesellschaft, 65 (5). Springer VS, Wiesbaden, pp. 1-19. ISBN ISSN: 2512-0883

Kornhuber, R. and Podlesny, J. and Yserentant, H. (2017) Direct and Iterative Methods for Numerical Homogenization. In: Domain Decomposition Methods in Science and Engineering. Lecture Notes in Computational Science and Engineering, XXIII (116). SpringerLink, pp. 217-225. ISBN 978-3-319-52389-7

Kornhuber, R. and Podlesny, J. and Yserentant, H. (2022) Numerical homogenization of fractal interface problems. ESAIM: M2AN, 56 (4). 1451- 1481. ISSN 2822-7840 - eISSN: 2804-7214

Kornhuber, R. and Sander, O. and Schiela, A. and Weiser, M. (2021) Wear Testing of Knee Implants. In: German Success Stories in Industrial Mathematics. Springer, pp. 85-90. ISBN Print 978-3-030-81454-0; Online 978-3-030-81455-7

Kornhuber, R. and Yserentant, H. (2016) Numerical Homogenization of Elliptic Multiscale Problems by Subspace Decomposition. Multiscale Model. Simul., 14 (3). pp. 1017-1036. ISSN print: 1540-3459; online: 1540-3467

Koronaki, D. Eleni and Evangelou, Nikolaos and Martin-Linares, Cristina P. and Titi, Edriss and Kevrekidis, Ioannis G. (2023) Nonlinear dimensionality reduction then and now: AIMs for dissipative PDEs in the ML era. Preprint . (Unpublished)

Kosari, Ehsan and Rosenau, Matthias and Bedford, Jonathan and Rudolf, Michael and Oncken, Onno (2020) On the relationship between offshore geodetic coverage and slip model uncertainty: Analog megathrust earthquake case studies. Geophysical Research Letters, 47 . pp. 1-15.

Kosari, Ehsan and Rosenau, Matthias and Oncken, Onno (2022) Strain signals governed by frictional-elastoplastic interaction of the upper plate and shallow subduction megathrust interface over seismic cycles. Tectonics . pp. 1-41. ISSN 1944-9194

Kosari, Ehsan and Rosenau, Matthias and Ziegenhagen, Thomas and Oncken, Onno (2022) Upper plate dynamic response to a sequential elastic rebound and slab acceleration in laboratory-scale subduction megathrust. Earth and Space Science Open Archive .

Kosari, Ehsan and Rosenau, Matthias and Ziegenhagen, Thomas and Oncken, Onno (2022) Upper plate response to a sequential elastic rebound and slab acceleration during laboratory-scale subduction megathrust earthquakes. JGR Solid Earth, 127 (9). pp. 1-16.

Kostré, Margarita and Schütte, Christof and Noé, Frank and del Razo, Mauricio J. (2021) Coupling Particle-Based Reaction-Diffusion Simulations with Reservoirs Mediated by Reaction-Diffusion PDEs. Sociaty for Industrial and Applied Mathematics, 19 (4).

Kowalik, Bartosz G. and Daldrop, Jan O. and Kappler, Julian and Schulz, J.C.F. and Schlaich, Alexander and Netz, Roland R. (2019) Memory-kernel extraction for different molecular solutes in solvents of varying viscosity in confinement. PhysRevE (100). 012126.

Krekeler, C. and Agarwal, A. and Junghans, C. and Praprotnik, M. and Delle Site, L. (2018) Adaptive Resolution Molecular Dynamics Technique: Down to the Essential. J. Chem. Phys., 149 . 024104. ISSN 0021-9606, ESSN: 1089-7690

Krämer, Andreas and Durumeric, Alexander E.P. and Charron, Nicholas E. and Chen, Yaoyi and Clementi, Cecilia and Noé, Frank (2023) Statistically Optimal Force Aggregation for Coarse-Graining Molecular Dynamics. The Journal of Physical Chemistry, 14 . pp. 3970-3979.

Kumar, B. and Janetzko , F. and Schumacher, J. and Shaw, R.A. (2012) Extreme responses of a coupled scalar–particle system during turbulent mixing. New Journal of Physics, 14 115020 .

Kumar, B. and Schumacher, J. and Shaw, R.A. (2013) Cloud microphysical effects of turbulent mixing and entrainment. Theoretical and Computational Fluid Dynamics , 27 (3-4). pp. 361-376. ISSN Print: 0935-4964; Online: 1432-2250

Kunnen, R. P. J. and Siewert, C. and Meinke, M. and Schröder, W. and Beheng, K.D. (2013) Numerically determined geometric collision kernels in spatially evolving isotropic turbulence relevant for droplets in clouds. Atmospheric Research, 127 . pp. 8-21. ISSN 0169-8095

Köhler, Jonas and Chen, Yaoyi and Krämer, Andreas and Clementi, Cecilia and Noé, Frank (2023) Flow-Matching: Efficient Coarse-Graining of Molecular Dynamics without Forces. J. Chem. Theory Comput., 19 (3). pp. 942-952.

Kühnlein, C. (2008) Adaptive meshes for meteorological applications. In: Atmospheric Boundary Layers: Concepts, Observations, and Numerical Simulations, Les Houches, Frankreich. (Unpublished)

Kühnlein, C. and Dörnbrack, A. (2008) Scalar advection with adaptive moving meshes. In: 1st International Workshop of EULAG Users, 7. Oktober 2008, Bad Tölz.

Kühnlein, C. and Smolarkiewicz, P. and Dörnbrack, A. (2012) Modelling atmospheric flows with adaptive moving meshes. Journal of Computational Physics, 231 (7). pp. 2741-2763. ISSN 0021-9991

Kühnlein, C. and Deconinck, W. and Klein, R. and Malardel, S. and Piotrowski, Z. and Smolarkiewicz, P. and Szmelter, J. and Wedi, N. (2019) A nonhydrostatic finite-volume dynamical core for the IFS. Geoscientific Model Development, 12 (2). pp. 651-676.

Kühnlein, C. and Deconinck, W. and Klein, R. and Malardel, S. and Piotrowski, Z. and Smolarkiewicz, P.K. and Szmelter, J. and Wedi, N. (2019) FVM 1.0: a nonhydrostatic finite-volume dynamical core for the IFS. Geosci. Model Dev., 12 (2). pp. 651-676. ISSN 1991-959X, ESSN: 1991-9603

L

Lai, King Chun and Matera, S. and Scheurer, C. and Reuter, K. (2023) A fuzzy classification framework to identify equivalent atoms in complex materials and molecules. Journal of Chemical Physics, 159 (2). ISSN 0021-9606

Lang, J. and Verwer, J. (2007) On Global Error Estimation and Control for Initial Value Problems. SIAM J. Sci. Comp., 29 (4). pp. 1460-1475. ISSN 1064-8275 (print) 1095-7197 (online)

Langfeld, B. and Mischau, A. (2014) Strukturen, Kulturen und Spielregeln. Faktoren erfolgreicher Berufsverläufe von Frauen und Männern in MINT. In: Schriften zur interdisziplinären Frauen- und Geschlechterforschung. Nomos. ISBN 978-3-8487-1339-4

Langfeldt, B. and Mehlmann, S. and Mischau, A. (2013) Genderkompetenz – (k)ein Thema in der universitären Lehramtsausbildung im Fach Mathematik? In: Diversity konkret gemacht. Wege zur Gestaltung von Vielfalt an Hochschulen. Diversity und Hochschule: Gestaltung von Vielfalt an Hochschulen . Beltz Juventa, pp. 13-29. ISBN 978-3-7799-2832-4

Langfeldt, B. and Mischau, A. (2018) Change and Persistence of Gender Disparities in Academic Careers of Mathematicians and Physicists in Germany. International Journal of Gender, Science and Technology, 10 (1). ISSN 2040-0748

Langfeldt, B. and Mischau, A. (2015) Die akademische Laufbahn in der Mathematik und Physik. Eine Analyse fach- und geschlechterbezogener Unterschiede bei der Umsetzung von Karrierewissen. Beiträge zur Hochschulforschung, 37 . pp. 80-99. ISSN 0171-645X

Langfeldt, B. and Mischau, A. and Michel, J. (2012) Make Engineering and Technology more appealing to women via gender competence as an innovative element of teacher-training in Mathematics. In: GIEE 2011: Gender and Interdisciplinary Education for Engineers. SensePublishers, Rotterdam, pp. 327-339. ISBN 978-94-6091-982-4_24

Langfeldt, B. and Mischau, A. and Reith, F. and Griffith, K. (2014) Leistung ist Silber, Anerkennung ist Gold. Geschlechterunterschiede im beruflichen Erfolg von MathematikerInnen und PhysikerInnen. In: Strukturen, Kulturen und Spielregeln. Faktoren erfolgreicher Berufsverläufe von Frauen und Männern in MINT. Schriften zur interdisziplinären Frauen- und Geschlechterforschung (10). Nomos, pp. 76-111. ISBN 978-3-8487-1339-4

Lavacchi, Laura and Daldrop, Jan O. and Netz, Roland R. (2022) Non-Arrhenius barrier crossing dynamics of non-equilibrium non-Markovian systems. Europhysics Letters, 139 (5). pp. 1-7.

Lavacchi, Laura and Kappler, Julian and Netz, Roland R. (2020) Barrier crossing in the presence of multi-exponential memory functions with unequal friction amplitudes and memory times. EPL, 131 . pp. 1-8.

Lazzaroni, Guiliano and Rossi, Riccarda and Thomas, Marita and Toader, Rodica (2018) Rate-independent damage in thermoviscoelastic materials with inertia. J Dyn Diff Equat, 30 . pp. 1311-1364.

Lelièvre, Tony and Pigeon, Thomas and Stoltz, Gabriel and Zhang, Wei (2023) Analyzing multimodal probability measures with autoencoders. To appear in The Journal of Physical Chemistry B . (In Press)

Lemke, O. and Keller, B.G. (2016) Density-based cluster algorithms for the identification of core sets. Journal of Chemical Physics, 145 (164104).

Letzel, M.O. and Helmke, C. and Ng, E. and An, X. and Lai, A. and Raasch, S. (2012) LES case study on pedestrian level ventilation in two neighbourhoods in Hong Kong. Meteorologische Zeitschrift, 21 (6). pp. 575-589.

Letzel, O. and Krane, M. and Raasch, S. (2008) High resolution urban large-eddy simulation studies from street canyon to neighbourhood scale. Atmospheric Environment, 42 (38). 8770-8784 .

Leung, T.Y. and Leutbecher, M. and Reich, S. and Shepherd, Th.G. (2019) Atmospheric Predictability: Revisiting the Inherent Finite-Time Barrier. Journal of the Atmospheric Sciences, 76 (12). pp. 3883-3892. ISSN Online: 1520-0469 Print: 0022-4928

Leung, Tsz Yan and Leutbecher, M. and Reich, S. and Shepherd, Th.G. (2020) Impact of the mesoscale range on error growth and the limits to atmospheric predictability. Journal of the Atmospheric Sciences, 77 (11). pp. 3769-3779. ISSN 1520-0469

Leung, Tsz Yan and Leutbecher, Martin and Reich, Sebastian and Shepherd, Theodore G. (2021) Forecast verification: relating deterministic and probabilistic metrics. Quarterly Journal of the Royal Meteorological Society . pp. 1-17. ISSN 1477-870X (Submitted)

Leyshon, Thomas and Tonello, Elisa and Schnoerr, David and Siebert, Heike and Stumpf, Michael P.H. (2021) The Design Principles of Discrete Turing Patterning Systems. Journal of Theoretical Biology, 531 .

Li, S. and Moreno, M. and Bedford, J. and Rosenau, M. and Oncken, O. (2015) Revisiting viscoelastic effects on interseismic deformation and locking degree: A case study of the Peru-North Chile subduction zone. Journal of Geophysical Research-Solid Earth, 120 (6). pp. 4522-4538.

Li, Q. and Bou-Zeid, E. and Vercauteren, N. and Parlange, M. B. (2018) Signatures of air-waves interactions over a large lake. Boundary-Layer Meteorology . pp. 1-24. ISSN 0006-8314

Li, Z. and Meunier, D. and Mollenhauer, M. and Gretton, A. (2023) Towards Optimal Sobolev Norm Rates for the Vector-Valued Regularized Least-Squares Algorithm. arXiv . (Submitted)

Li, Z. and Meunier, D. and Mollenhauer, Mattes and Gretton, A. (2023) Optimal Rates for Regularized Conditional Mean Embedding Learning. Advances in Neural Information Processing Systems (NeurIPS), 36 . (Submitted)

Liero, M. and Mielke, A. and Peletier, M. A. and Renger, M. (2017) On microscopic origins of generalized gradient structures. Discrete and Continuous Dynamical Systems - Series S, 10 (1).

Liero, M. and Mielke, A. and Savaré, G. (2018) Optimal Entropy-Transport problems and a new Hellinger-Kantorovich distance between positive measures. Inventiones mathematicae, 211 . pp. 969-1117. ISSN 1432-1297 (online)

Liero, M. and Mielke, A. and Savaré, G. (2016) Optimal Transport in Competition with Reaction: The Hellinger--Kantorovich Distance and Geodesic Curves. SIAM J. Math. Anal., 48 (2). pp. 2869-2911. ISSN 1095-7154 (online)

Liero, Matthias and Mielke, Alexander and Savaré, Giuseppe (2023) Fine properties of geodesics and geodesic lambda-convexity for the Hellinger-Kantorovich distance. Archive for Rational Mechanics and Analysis, 247 (112).

Liu, Dishi and Litvinenko, Alexander and Schillings, Claudia and Schulz, Volker (2017) Quantification of airfoil geometry-induced aerodynamic uncertainties---comparison of approaches. SIAM/ASA Journal on Uncertainty Quantification, 5 (1).

Liu, X. and Klein, R. (2024) On the boundary layer arising from fast internal waves dynamics. (Submitted)

Liu, Xin and Titi, Edriss S. and Xin, Zhouping (2024) Asymptotic stability of the equilibrium for the free boundary problem of a compressible atmospheric primitive model with physical vacuum. Preprint . (Unpublished)

Loche, Philip and Ayaz, Cihan and Schlaich, Alexander and Uematsu, Yuki and Netz, Roland R. (2019) Giant Axial Dielectric Response in Water-Filled Nanotubes and Effective Electrostatic Ion–Ion Interactions from a Tensorial Dielectric Model. J. Phys. Chem. B, 123 (50). pp. 10850-10857.

Lorenzi, J. M. and Matera, S. and Reuter, K. (2016) Synergistic Inhibition of Oxide Formation in Oxidation Catalysis: A First-Principles Kinetic Monte Carlo Study of NO + CO Oxidation at Pd(100). ACS Catalysis, 6 (8). pp. 5191-5197. ISSN 2155-5435

Lorenzi, Juan M. and Matera, S. and Reuter, K. (2016) A first-principles kinetic Monte Carlo study of NO+ CO oxidation at Pd(100). ACS Catalysis, 6 (8). pp. 5191-5197. ISSN 2155-5435

Löbig, S. and Dörnbrack, A. and Fröhlich, J. and Hertel, C. and Kühnlein, C. and Lang, J. (2009) Towards Large-Eddy Simulation on moving grids. PAMM · Proc. Appl. Math. Mech., 9 . 445 -446.

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Matera, S. and Merdon, C. and Runge, D. (2023) Reduced Basis Approach for Convection-Diffusion Equations with Non-linear Boundary Reaction Conditions. In: International Conference on Finite Volumes for Complex Applications, 30 October - 3 November 2023, Strasbourg, France.

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Moschner, Johann and Stulberg, Valentina and Fernandes, Rita and Huhmann, Susanne and Leppkes, Jakob and Koksch, Beate (2019) Approaches to Obtaining Fluorinated α-Amino Acids. Chem. Rev. 2019, 119 (18). pp. 10718-10801.

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Müller, A. and Névir, P. and Klein, R. (2018) Scale Dependent Analytical Investigation of the Dynamic State Index Concerning the Quasi-Geostrophic Theory. Mathematics of Climate and Weather Forecasting, 4 (1). pp. 1-22. ISSN 2353-6438 (online)

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Münch, M. (2013) Konzept zur Absicherung von CFD-Simulationen im Brandschutz und in der Gefahrenabwehr. INURI-Verlag. ISBN 978-3-944809-00-7

Münch, M. (2008) Modellierung der Rauchausbreitung bei Gebäudebränden. In: Meterologisches Kolloquium, 10. Juli 2008, Berlin, FU-Berlin, Institut für Meterologie. (Unpublished)

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Münch, M. (2009) Richtig schnell rechnen. In: 3. FDS-Usergroup Treffen, 29.-30. Oktober 2009, hhpberlin, Rotherstr. 19, 10245 Berlin. (Unpublished)

Münch, M. (2009) Verification and Validation of CFD-Models applied to fire detection. In: 14th International Conference on Automatic Fire Detection, 8.-10. September 2009, Duisburg, Germany.

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Münch, M. and Belaschk, H.C. and Klein, R. (2015) Grundlagen der Brandsimulation - Einführung in die übergeordneten Zusammenhänge. Bauphysik-Kalender 2015 : Schwerpunkt: Simulations- und Berechnungsverfahren . Ernst, Wilhelm & Sohn, Berlin. ISBN 978-3-433-03105-6

Münch, M. and Belaschk, H.C. and Klein, R. (2011) Numerische Simulation im Brandschutz - Zwischen Theorie und Praxis. In: Bauphysik-Kalender 2011. Ernst & Sohn Verlag für Architektur und technische Wissenschaften GmbH & Co. KG, Berlin, pp. 159-197. ISBN ISBN 978-3-433-02965-7

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Münch, M. and Gerber, S. and Oevermann, M. (2013) Analyse von verschiedenen Verbrennungsmodellen im Hinblick auf Brandsimulationen in praktischen Geoemtrien. In: 3. Magdeburger Brand- und Explosionsschutztag, 21./22. März 2013, Otto-von-Guericke Universität Magdeburg.

Münch, M. and Kaiser, G. (2012) Kinderwagen und andere Brandlasten in Treppenhäusern. Der feine Unterschied zwischen richtig und rechtmäßig. Das Grundeigentum, Recht und Praxis, 17 . pp. 1144-1148.

Münch, M. and Kaiser, G. (2013) Verbrennungsdynamik, Rauchgastoxizität und ihre Folgen. Eine kleine Argumentationshilfe für die Brandschutzaufklärung. schadenprisma, 1 . pp. 4-8.

Münch, M. and Kilian, S. (2010) A new generalized domain decomposition strategy for the efficient parallel solution of the FDS-pressure equation, Part II: Verification and Validation. ZIB-Report, ZR_09-20 . 40p.. ISSN 1438-0064

Münch, M. and Klein, R. (2008) Anforderungen an numerische Berechnungen der Brand- und Rauchausbreitung im Vorbeugenden Brandschutz. vfdb-Zeitschrift Forschung, Technik und Management im Brandschutz, Jg. 57 (3). pp. 145-151. ISSN 0042-1804

Münch, M. and Klein, R. (2012) CFD at its Limits: Scaling Issues, Uncertain Data, and the User's Role. In: Process and Plant Safety, Applying Computational Fluid Dynamics. Wiley-VCH Verlag GmbH & Co.KGaA, pp. 189-212. ISBN 978-3-527-33027-0

Münch, M. and Klein, R. (2008) Critical numerical aspects for field model applications. In: EUSAS conference on "Fire Safety Engineering and Smoke Control in Buildings", January 22-23, 2007, Vienna, Austria.

Münch, M. and Klein, R. (2008) Critical numerical aspects for field model applications. EUSAS Journal (4). pp. 41-54.

Münch, M. and Lorenz, S. (2004) MathInside! Wie Mathematik helfen kann. In: Innovationen im Bauwesen, 6. Sept. 2004, Berlin, InnovationsZentrum Bau Berlin e.V.. (Unpublished)

Münch, M. and Schmidt, H. and Klein, R. (1999) Tracking Flame Fronts with Dynamic Internal Structure. Modelling of reaction fronts at the interface of mathematics physics and chemistry. Technical Report. Universite Claude Bernard, Lyon, France.

Münch, M. and Schmidt, H. and Oevermann, M. and Klein, R. (2006) Numerical Investigation of the Baroclinic Torque in the Context of Smoke Spread. In: 31th Int. Symp. on Combustion, Aug. 6-11, 2006, The Combustion Institute, Heidelberg.

Münch, M. (2006) Kritische Numerische Aspekte bei der Anwendung von Feldmodellen. In: 55. Jahresfachtagung der Vereinigung zur Förderung des Deutschen Brandschutzes e.V., 21. - 25. Mai 2006, Salzburg.

Münch, M. (2008) MOLOCH - Ein Strömungsverfahren für inkompressible Strömungen - Technische Referenz. PIK-Report (109).

N

Nadolski, M. and Rezay Haghdoost, M. and Gray, J.A.T. and Edgington-Mitchell, D. and Oberleithner, K. and Klein, R. (2018) Validation of numerical simulations by the exhaust flow of a PDC based high speed schlieren. In: Notes on Numerical Fluid Mechanics and Multidisciplinary Design Active Flow and Combustion Control 2018. Notes on Numerical Fluid Mechanics and Multidisciplinary Design book series (NNFM, 141 . Springer International Publishing, pp. 237-253. ISBN 978-3-319-98176-5

Naliboff, J.B. and Glerum, A. and Brune, S.A. and Péron-Pinvidic, G. and Wrona, T. (2020) Development of 3-D Rift Heterogeneity Through Fault Network Evolution. Geophysical Research Letters, 47 (13). ISSN 0094-8276; ESSN: 1944-8007

Netz, R.R. (2017) Fluctuation-dissipation relation and stationary distribution for an exactly solvable many-particle model far from equilibrium. SFB 1114 Preprint 12/2017 . (Unpublished)

Netz, Roland R. (2020) Approach to equilibrium and nonequilibrium stationary distributions of interacting many-particle systems that are coupled to different heat baths. Phys. Rev. E, 101 . ISSN 022120

Netz, Roland R. (2018) Fluctuation-dissipation relation and stationary distribution of an exactly solvable many-particle model for active biomatter far from equilibrium. J. Chem. Phys., 148 . ISSN 0021-9606, ESSN: 1089-7690

Netz, Roland R. (2020) Mechanisms of Airborne Infection via Evaporating and Sedimenting Droplets Produced by Speaking. Journal Phys. Chem. B, 124 (133). pp. 7093-7101.

Netz, Roland R. and Eaton, William A. (2021) Estimating computational limits on theoretical descriptions of biological cells. PNAS, 118 . pp. 1-3. ISSN 1091-6490 (online)

Neureither, L. and Hartmann, C. (2019) Time scales and exponential trends to equilibrium: Gaussian model problems. In: Stochastic Dynamics Out of Equilibrium. IHPStochDyn 2017. Springer Proceedings in Mathematics & Statistics, 282 . Springer, pp. 391-410. ISBN 978-3-030-15095-2

Nevo, G. and Vercauteren, N. and Kaiser, A. and Dubrulle, B. and Faranda, D. (2017) A statistical-mechanical approach to study the hydrodynamic stability of stably stratified atmospheric boundary layer. Physical Review Fluids, 2 (8). 084603.

Nguyen van yen, N. and Waidmann, M. and Klein, R. and Farge, M. (2018) Energy dissipation caused by boundary layer instability at vanishing viscosity. Journal of Fluid Mechanics, 849 . pp. 676-717.

Nickl, Richard and Titi, Edriss (2023) On posterior consistency of data assimilation with Gaussian process priors: the 2D Navier-Stokes equations. ArXiv . (Unpublished)

Niemann, Jan-Hendrik and Klus, Stefan and Schütte, Christof (2021) Data-driven model reduction of agent-based systems using the Koopman generator. PLOS ONE, 16 (5).

Niemann, Jan-Hendrik and Winkelmann, Stefanie and Wolf, S. and Schütte, Christof (2021) Agent-based modeling: Population limits and large timescales. Chaos: An Interdisciplinary Journal of Nonlinear Science, 31 (3).

Nissen, K.M. and Ulbrich, U. (2017) Increasing frequencies and changing characteristics of heavy precipitation events threatening infrastructure in Europe under climate change. Nat. Hazards Earth Syst. Sci., 17 . pp. 1177-1190.

Noé, F. and Olsson, S. and Köhler, J. and Wu, H. (2019) Boltzmann Generators: Sampling Equilibrium States of Many-Body Systems with Deep Learning. Science, 365 (6457). eaaw1147.

Noé, Frank (2020) Machine Learning for Molecular Dynamics on Long Timescales. Machine Learning Meets Quantum Physics . pp. 331-372.

Noé, Frank and Klein, Leon Transferable Boltzmann Generators. Preprint arXiv . (Unpublished)

Noé, Frank and Tkatchenko, Alexandre and Müller, Klaus-Robert and Clementi, Cecilia (2020) Machine Learning for Molecular Simulation. Annual Review of Physical Chemistry, 71 . pp. 361-390.

Nüske, Feliks and Boninsegna, Lorenzo and Clementi, Cecilia (2019) Coarse-graining molecular systems by spectral matching. J. Chem. Phys., 151 . pp. 1-10. ISSN 0021-9606, ESSN: 1089-7690

Nüske, Feliks and Koltai, Péter and Boninsegna, Lorenzo and Clementi, Cecilia (2021) Spectral Properties of Effective Dynamics from Conditional Expectations. Entropy, 23 (134). pp. 1-25.

Nüsken, N. and Reich, S. (2019) Note on Interacting Langevin Diffusions: Gradient Structure and Ensemble Kalman Sampler by Garbuno-Inigo, Hoffmann, Li and Stuart. arXive . pp. 1-6. (Submitted)

Nüsken, N. and Reich, S. and Rozdeba, P.J. (2019) State and parameter estimation from observed signal increments. Entropy, 21 (5). -505. ISSN 1099-4300

Nüsken, N. and Renger, M. (2021) Stein Variational Gradient Descent: many-particle and long-time asymptotics. arXive . pp. 1-25. (Unpublished)

Nüsken, N. and Richter, L. (2020) Solving high-dimensional Hamilton-Jacobi-Bellman PDEs using neural networks: perspectives from the theory of controlled diffusions and measures on path space. SFB 1114 Preprint in arXiv . pp. 1-40. (Submitted)

Nüsken, Nikolas and Renger, D.R. Michiel (2021) Stein Variational Gradient Descent:many-particle and long-time asymptotics. arxiv preprint . pp. 1-25. (Submitted)

Nüsken, Nikolas and Richter, Lorenz (2023) Interpolating Between BSDEs and PINNs: Deep Learning for Elliptic and Parabolic Boundary Value Problems. Journal of Machine Learning, 2 . pp. 31-64.

Nüsken, Nikolas and Richter, Lorenz (2021) Solving high-dimensional Hamilton–Jacobi–Bellman PDEs using neural networks: perspectives from the theory of controlled diffusions and measures on path space. Partial Differential Equations and Applications, 2 (48). pp. 1-48.

O

O'Kane, T.J. and Monselesan, D.P. and Risbey, J.S. and Horenko, I. and Franzke, Ch.L.E. (2017) On memory, dimension, and atmospheric teleconnection patterns. Math. Clim. Weather Forecast, 3 (1). pp. 1-27.

O'Neill, W.P. and Klein, R. (2014) A moist pseudo-incompressible model. Atmospheric Research, 142 (1). pp. 133-141.

Oesting, Marco and Schlather, Martin and Schillings, Claudia (2019) Sampling sup‐normalized spectral functions for Brown–Resnick processes. Stat, 8 (1).

Oevermann, M. and Klein, R. (2014) An asymptotic solution approach for elliptic equations with discontinuous coefficients. Journal of Computational Physics, 261 . pp. 230-243.

Oevermann, M. and Klein, R. (2006) A cartesian grid finite volume method for the solution of the Poisson equation with variable coefficients and embedded interfaces. Journal of Computational Physics, 219 (2). 749-769 .

Oevermann, M. and Klein, R. (2006) A cartesian grid finite volume method for the solution of the Poisson equation with variable coefficients and embedded interfaces. JCP .

Oevermann, M. and Scharfenberg , C. and Klein, R. (2009) A sharp interface finite volume method for elliptic equations on Cartesian grids. Journal of Computational Physics, 228 (14). pp. 5184-5206.

Oevermann, M. and Schmidt, H. and Kerstein, A.R. (2008) HCCI combustion modeling using detailed chemistry coupled to LEM-based advection. Combustion and Flame, 155 . pp. 370-379.

Oevermann, M. and Schmidt, H. and Kerstein, A.R. (2008) Investigation of autoignition under thermal stratification using linear eddy modeling. Combustion and Flame Volume, 155 (3). 370-379 .

Osagiede, Edoseghe E. and Rosenau, Matthias and Rotevatn, Atle and Gawthorpe, Robert and Jackson, Christopher A-L and Rudolf, Michael (2021) Influence of zones of pre-existing crustal weakness on strain localization and partitioning during rifting: Insights from analogue modeling using high resolution 3D digital image correlation. EarthArXiv . pp. 1-55. (Submitted)

Owinoh, A.Z. and Hunt, J. and Orr, A. and Clark, P. and Klein, R. and Fernando, H. and Nieuwstadt, F. (2005) Effects Of Changing Surface Heat Flux On Atmospheric Boundary-Layer Flow Over Flat Terrain. Boundary Layer Meterology, 116 (2). pp. 331-361.

Owinoh, A.Z. and Stevens, B. and Klein, R. (2011) Multiscale Asymptotics Analysis for the Mesoscale Dynamics of Cloud-Topped Boundary Layers. Journal of the Atmospheric Sciences, 68 (2). pp. 379-402. ISSN Online 1520-0469, Print 0022-4928

O’Kane, T.J. and Risbey, J.S. and Monselesan, D.P. and Horenko, I. and Franzke, Ch.L.E. (2015) On the dynamics of persistent states and their secular trends in the waveguides of the Southern Hemisphere troposphere. Climate Dynamics . ISSN Print: 0930-7575, Online: 1432-0894

P

Pacey, George and Pfahl, Stephan and Schielicke, Lisa and Wapler, Kathrin (2023) The climatology and nature of warm-season convective cells in cold-frontal environments over Germany. Natural Hazards Earth System Sciences, 23 (12). pp. 3703-3721.

Paeschke, E. and Marschalik, P. and Owinoh, A.Z. and Klein, R. (2012) Motion and structure of atmospheric mesoscale baroclinic vortices: dry air and weak environmental shear. Journal of Fluid Mechanics, 701 . pp. 137-170.

Panahian Jand, Sara and Nourbakhsh, Zahra and Delle Site, Luigi (2022) Nuclear Quantum Effects in Fullerene-Fullerene Aggregation in Water. Front. Chem., 10 . pp. 1-8.

Papke, A. (2009) Mindestens 17 müssen es sein. Junge Wissenschaft, 84 . pp. 24-31.

Papke, A. (2008) Wie viele Zahlen müssen es sein? Die Junge Wissenschaft, 79 . pp. 46-51.

Papke, A. and Battiato, I. (2013) A reduced complexity model for dynamic similarity in obstructed shear flows. Geophysical Research Letters, 40 (15). pp. 3888-3892.

Papke, A. (2017) Atmospheric vortex stability under vertical shear. PhD thesis, FU Berlin, FB Mathematik & Informatik.

Park, S.B. and Baik, J.J. and Raasch, S. and Letzel, M.O. (2012) A large-eddy simulation study of thermal effects on turbulent flow and dispersion in and above a street canyon. J. Appl. Meteor. Climatol., 51 (5). pp. 829-841. ISSN Online: 1558-8432 Print: 1558-8424

Patterson, R. I. A (2016) Properties of the solutions of delocalised coagulation and inception problems with outflow boundaries. Journal of Evolution Equations, 16 . pp. 261-291.

Patterson, Robert I. A. and Renger, Michiel D.R. (2019) Large deviations of jump process fluxes. Math. Phys. Anal. Geom., 22 (21). pp. 1-32. ISSN 1385-0172; ESSN: 1572-9656

Patterson, Robert I.A. and Renger, D.R. Michiel and Sharma, Upanshu (2021) Variational structures beyond gradient flows: a macroscopic fluctuation-theory perspective. arXive . pp. 1-47. (Unpublished)

Paul, F. and Weikl, T. (2016) How to Distinguish Conformational Selection and Induced Fit Based on Chemical Relaxation Rates. PLOS Computational Biology .

Paul, F. and Wu, H. and Vossel, M. and de Groot, B.L. and Noé, F. (2019) Identification of kinetic order parameters for non-equilibrium dynamics. J. Chem. Phys., 150 (16). p. 164120. ISSN 0021-9606, ESSN: 1089-7690

Pavliotis, Grigorios A. and Reich, Sebastian and Zanoni, Andrea (2024) Filtered data based estimators for stochastic processes driven by colored noise. Preprint arXiv . (Unpublished)

Peschka, D. and Thomas, M. and Ahnert, T. and Münch, A. and Wagner, B. (2019) Gradient structures for flows of concentrated suspensions. Topics in Applied Analysis and Optimisation . pp. 295-318.

Peschka, Dirk and Zafferi, Andrea and Heltai, Luca and Thomas, Marita (2022) Variational Approach to Fluid–Structure Interaction via GENERIC. Journal of Non-Equilibrium Thermodynamics . ISSN 1437-4358

Peschka, Dirk and Zafferi, Andrea and Heltai, Luca and Thomas, Marita (2021) Variational approach to fluid-structure interaction via GENERIC. WIAS Preprint . pp. 1-13. (Submitted)

Peters, J.H. and Gräser, C. and Klein, R. (2017) Membrane Deformation by N-BAR Proteins: Extraction of membrane geometry and protein diffusion characteristics from MD simulations. SFB 1114 Preprint in arXiv:1712.02666 . pp. 1-12. (Unpublished)

Petoukhov, V. and Eliseev, A. and Klein, R. and Oesterle, H. (2008) On the statistics of the free-troposphere synoptic component. Part I: An evaluation of skewnesses and estimation of the third-order moments contribution to the synoptic-scale dynamics and meridional fluxes of heat and humidity. Tellus, 60 (1). pp. 11-31.

Pinamonti, G. and Paul, F. and Noé, F. and Rodriguez, A. and Bussi, G. (2019) The mechanism of RNA base fraying: Molecular dynamics simulations analyzed with core-set Markov state models. J. Chem. Phys., 150 (15). p. 154123. ISSN 0021-9606, ESSN: 1089-7690

Pincus, R. and Stevens, B. (2008) Monte Carlo spectral integration: A consistent approximation for radiative transfer in large eddy simulations. Journal of Advancesin Modeling Earth Systems, 1 . p. 9.

Pingen, G. and Waidmann, M. and Evgrafov, A. and Maute, K. (2007) Application of a Parametric Level-Set Approach to Topology Optimization of Fluids with the Navier–Stokes and Lattice Boltzmann Equations. 7th World Congress on Structural and Multidisciplinary Optimization .

Pingen, G. and Waidmann, M. and Evgrafov, A. and Maute, K. (2009) A Parametric Level-Set Approach for Topology Optimization of Flow Domains. Structural and Multidisciplinary Optimization . ISSN 1615-147X (Print) 1615-1488 (Online)

Pipping, E. (2019) Existence of long-time solutions to dynamic problems of viscoelasticity with rate-and-state friction. ZAMM - Journal of Applied Mathematics and Mechanics . ISSN 1521-4001 (online)

Pipping, E. and Kornhuber, R. and Rosenau, M. and Oncken, O. (2016) On the efficient and reliable numerical solution of rate-and-state friction problems. Geophysical Journal International, 204 (3). pp. 1858-1866. ISSN Online: 1365-246X Print: 0956-540X

Plagge, M. and Münch, M. (2015) Bug oder Feature? Über numerische Lichtschutzfaktoren im fvDOM-Strahlungsmodell. In: 3. vfdb-Workshop Brandschutzforschung, 26./27. März 2015, Otto-von-Guericke Universität Magdeburg, Hochschule Magdeburg. (Unpublished)

Polzin, Robert and Klebanov, Ilja and Nüsken, Nikolas and Koltai, Péter (2024) Coherent set identification via direct low rank maximum likelihood estimation. Journal of Nonlinear Science .

Polzin, Robert and Klebanov, Ilja and Nüsken, Nikolas and Koltai, Péter (2023) Nonnegative matrix factorization for coherent set identification by direct low rank maximum likelihood estimation. arXiv . pp. 1-43. (Unpublished)

Polzin, Robert and Müller, Annette and Rust, Henning W. and Névir, Peter and Koltai, Péter (2022) Direct Bayesian model reduction of smaller scale convective activity conditioned on large-scale dynamics. Nonlinear Processes in Geophysics, 29 (1). pp. 37-52.

Poppe, S. and Holohan, E.P. and Rudolf, M. and Rosenau, M. and Galland, O. and Delcamp, A. and Kervyn, M. (2021) Mechanical properties of quartz sand and gypsum powder (plaster) mixtures: 25implications for laboratory model analoguesfor the Earth’s upper crust. EartharXiv . pp. 1-55.

Poppe, S. and Holohan, Eoghan P. and Rudolf, M. and Rosenau, M. and Galland, O. and Delcamp, A. and Kervyn, M. (2021) Mechanical test data of quartz sand, garnet sand, gypsum powder (plaster), kaolin and sand-plaster mixtures used as granular analogue materials in geoscience laboratory experiments. Tectonophysics, 814 . p. 228976. ISSN 0040-1951

Pospisil, L. and Gagliardini, P. and Sawyer, W. and Horenko, I. (2018) On a scalable nonparametric denoising of time series signals. Communications in Applied Mathematics and Computational Science, 13 (1). pp. 107-138.

Prieto, M. J. and Mullan, T. and Schlutow, M. and Gottlob, D. M. and Tanase, L. C. and Menzel, D. and Sauer, J. and Usvyat, D. and Schmidt, T. and Freund, H.-J. (2021) Insights into reaction kinetics in confined space: real time observation of water formation under a silica cover. Journal of the American Chemical Society, 143 . pp. 8780-8790.

Pütz, C. and Schlutow, M. and Klein, R. (2019) Initiation of ray tracing models: Evolution of small-amplitude gravity wave packets in non-uniform background. Theoretical and Computational Fluid Dynamics, 33 (5). pp. 509-535. ISSN Elektronisch: 1432-2250; Print: 0935-4964

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Queck, R. and Bernhofer, C. (2010) Constructing wind profiles in forests from limited measurements of wind and vegetation structure. Agricultural and Forest Meteorology .

Queck, R. and Bienert, A. (2009) Estimation of PBL model parameters from high resolution vegetation scans. Geophysical Research Abstracts, 11 (EGU2009-10888).

Queck, R. and Bienert, A. and Eipper, T. (2010) Sturmsicherer Wald. ARD.

Queck, R. and Bienert, A. and Harmansa, S. (2009) Calculating advective fluxes in tall canopies – Towards better wind speed distribution using 3D vegetation scans in high resolution. In: Atmospheric Transport and Chemistry in Forest Ecosystems, Oct 5 - 8, 2009., Castle of Thurnau.

Queck, R. and Bienert, A. and Harmansa, S. (2009) Modeling wind fields in tall canopies - towards better momentum distribution using 3D vegetation scans in high resolution. In: 2nd International Conference “Wind Effects on Trees”. , 13-16 October 2009, Albert-Ludwigs-University of Freiburg, Germany. (Unpublished)

Queck, R. and Bienert, A. and Maas, H.-G and Hermansa, S. and Goldberg, V. and Bernhofer, C. (2011) Wind fields in heterogeneous conifer canopies: parameterisation of momentum absorption using high-resolution 3D vegetation scans. European Journal of Forest Research, 130 . ISSN 1612-4669 (Print) 1612-4677 (Online)

Queck, R. and Bernhofer, C. and Bienert, A. and Eipper, T. and Goldberg, V. and Harmansa, S. and Hildebrand, V. and Maas, H.-G and Schlegel, F. and Stiller, J. (2014) TurbEFA: an interdisciplinary effort to investigate the turbulent flow across a forest clearing. Meteorologische Zeitschrift, 1 .

Queck, R. and Bernhofer, C. and Goldberg, V. and Harmansa, S. and Bienert, A. and Maas, H.-G and Schlegel, F. and Stiller, J. and Eipper, T. and Hildebrand, V. (2014) TurbEFA: Ein interdisziplinärer Ansatz zur Untersuchung der turbulenten Strömung an einer Waldlichtung. In: 8. Biomet Tagung "Mensch-Pflanze-Atmosphäre im 21. Jahrhundert", 2.-3.12.14, Dresden.

Quer, J. and Donati, L. and Keller, B.G. and Weber, M. (2017) An automatic adaptive importance sampling algorithm for molecular dynamics in reaction coordinates. SIAM J. Sci. Comput. . pp. 1-19. ISSN 1064-8275 (print) (In Press)

Quer, J. and Lie, H. (2017) Some connections between importance sampling and enhanced sampling methods in molecular dynamics. Journal of Chemical Physics . pp. 1-19. ISSN 0021-9606

Quer, J. and Weber, M. (2016) Estimating exit rate for rare event dynamical systems by extrapolation. ZIB-Report . pp. 1-19. ISSN 2192-7782 (online)

Quer, Jannes and Ribera Borrell, Enric (2024) Connecting Stochastic Optimal Control and Reinforcement Learning. Submitted Preprint . (Submitted)

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Rams, Mona and Conrad, T. O. F. (2022) Sparse dictionary learning allows model-free pseudotime estimation of transcriptomics data. BMC Genomics, 23 (56). ISSN 1471-2105

Ray, Sourav and Sunkara, Vikram and Schütte, Christof and Weber, Marcus (2020) How to calculate pH-dependent binding rates for receptor–ligand systems based on thermodynamic simulations with different binding motifs. Molecular Simulation, 46 (18). pp. 1443-1452.

Reible, Benedikt and Hartmann, Carsten and Delle Site, Luigi (2022) Two-sided Bogoliubov inequality to estimate finite size effects in quantum molecular simulations. Letters in Mathematical Physics, 112 (97).

Reible, Benedikt M. and Hille, Julian F. and Hartmann, Carsten and Delle Site, Luigi (2023) Finite-size effects and thermodynamic accuracy in many-particle systems. Physical Review Research, 5 (2).

Reichel , T. and Schäpel, J.S. and Bobusch, B. and Klein, R. and King, R. and Paschereit, C. O. (2016) Shockless Explosion Combustion: Experimental Investigation of a New Approximate Constant Volume Combustion Process. Journal of Engineering for Gas Turbines and Power, 139 (2). 021504 -021511. ISSN 0742-4795

Reinecke , M. and Hillebrandt , W. and Niemeyer , J.C. and Klein, R. and Gröbl, A. (1999) A new model for deflagration fronts in reactive fluids. Astronomy and Astrophysics, 347 (1999A&A...347..724R). 724-733 . ISSN 0004-6361 (Print) 1432-0746 (Online)

Reith, F. and Langfeldt, B. and Griffiths, K. and Mischau, A. (2014) Geschlechterunterschiede in der Selbstpräsentation und der Vernetzung als ausgewählte Karrierestrategien von MathematikerInnen und PhysikerInnen in Wissenschaft und Wirtschaft. In: Karriereverläufe in Forschung und Entwicklung. Bedingungen und Perspektiven im Spannungsfeld von Organisation und Individuum. Logos, pp. 250-270. ISBN 978-3-8325-3587-2

Remmler, S. and Fruman, M. D. and Hickel, S. (2013) Direct numerical simulation of a breaking inertia-gravity wave. Journal of Fluid Mechanics, 722 . pp. 424-436.

Remmler, S. and Hickel, S. (2012) Direct and large-eddy simulation of stratified turbulence. International Journal of Heat and Fluid Flow, 35 . pp. 13-24. ISSN 0142-727X

Remmler, S. and Hickel, S. (2014) Spectral eddy viscosity of stratified turbulence. Journal of Fluid Mechanics . (In Press)

Renger, D.R. Michiel and Zimmer, Johannes (2021) Orthogonality of fluxes in general nonlinear reaction networks. DCDS-S 2021, 14 (1). pp. 205-217. (Submitted)

Renger, M. (2018) Flux large deviations of independent and reacting particle systems, with implications for macroscopic fluctuation theory. J. Stat. Phys., 172 (5). pp. 1261-1326. ISSN 0022-4715

Renger, M. and Zimmer, J. (2019) Orthogonality of fluxes in general nonlinear reaction networks. SFB1114 Preprint 07/2019 in WIAS No. 2609 . pp. 1-12. (Unpublished)

Rentsch, Jakob and Bandstra, Selle and Sezen, Batuhan and Sigrist, Philipp Stephan and Bottanelli, Francesca and Schmerl, Bettina and Shoichet, Sarah and Noé, Frank and Sadeghi, Mohsen and Ewers, Helge (2024) Sub-membrane actin rings compartmentalize the plasma membrane. Journal of Cell Biology (JCB), 223 (4).

Reuten, Raphael and Zendehroud, Sina and Nicolau, Monica and Fleischhauer, Lutz and Laitala, Anu and Kiderlen, Stefanie and Nikodemus, Denise and Wullkopf, Lena and Nielsen, Sebastian Rune and McNeilly, Sarah and Prein, Carina and Rafaeva, Maria and Schoof, Erwin M. and Furtwängler, Benjamin and Porse, Bo T. and Kim, Hyobin and Won, Kyoung Jae and Sudhop, Stefanie and Westarp Zornhagen, Kamilla and Suhr, Frank and Maniati, Eleni and Pearce, Oliver M. T. and Koch, Manuel and Broeng Oddershede, Lene and Van Agtmael, Tom and Madsen, Chris D. and Mayorca-Guiliani, Alejandro E. and Bloch, Wilhelm and Netz, Roland R. and Clausen-Schaumann, Hauke and Erler, Janine T. (2021) Basement membrane stiffness determines metastases formation. Nature Materials, 20 . pp. 892-903.

Rezaei, majid and Netz, Roland R. (2021) Airborne virus transmission via respiratory droplets: Effects of droplet evaporation and sedimentation. ScienceDirect, 55 . ISSN 101471

Richter, Lorenz and Berner, Julius (2022) Robust SDE-Based Variational Formulations for Solving Linear PDEs via Deep Learning. Preprint arXiv . (Unpublished)

Richter, Lorenz and Berner, Julius and Liu, Guang-Horng (2023) Improved sampling via learned diffusions. Preprint . (Unpublished)

Richter, Lorenz and Boustati, Ayman and Nüsken, Nikolas and Ruiz, Francisco J. R. and Akyildiz, Ömer Deniz (2020) VarGrad: A Low-Variance Gradient Estimator for Variational Inference. Advances in Neural Information Processing Systems 2020 . pp. 1-25. (Submitted)

Richter, Lorenz and Sallandt, Leon and Nüsken, Nikolas (2023) From continuous-time formulations to discretization schemes: tensor trains and robust regression for BSDEs and parabolic PDEs. Preprint . (Unpublished)

Richter, Lorenz and Sallandt, Leon and Nüsken, Nikolas (2021) Solving high-dimensional parabolic PDEs using the tensor train format. Proceedings of the 38th International Conferenceon Machine Learning, 139 . pp. 8998-9009.

Riechelmann, T. and Noh, Y . and Raasch, S. (2012) A new method for large-eddy simulations of clouds with Lagrangian droplets including the effects of turbulent collision. New Journal of Physics, 14 (065008).

Riechelmann, T. and Wacker, U. and Beheng, K.D. and Etling, D. and Raasch, S. (2015) Influence of turbulence on the drop growth in warm clouds, Part II: sensitivity studies with a spectral bin microphysics and a Lagrangian cloud model. Meteorologische Zeitschrift .

Riedel, J. and Gelß, P. and Klein, R. and Schmidt, B. (2023) WaveTrain: A Python Package for Numerical Quantum Mechanics of Chain-Like Systems Based on Tensor Trains. J. Chem. Phys. (164801), 158 (16). ISSN 0021-9606

Rieper, F. and Achatz, U. and Klein, R. (2012) Validation of an extended non-linear WKB theory: 1D and 2D case. Journal of Fluid Mechanics . (Submitted)

Rieper, F. and Hickel, S. and Achatz, U. (2013) A conservative integration of the pseudo-incompressible equations with implicit turbulence parameterization. Monthly Weather Review , 141 (3). pp. 861-886. ISSN Online: 1520-0493; Print: 0027-0644

Ring, S. and Oberhofer, H. and Hille, C. and Matera, S. and Reuter, K. (2016) Function-Space-Based Solution Scheme for the Size-Modified Poisson–Boltzmann Equation in Full-Potential DFT. Journal of Chemical Theory and Computation, 12 (8). pp. 4052-4066. ISSN 1549-9618

Rinne, K.F. and Schulz, J.C.F. and Netz, R.R. (2015) Impact of secondary structure and hydration water on the dielectric spectrum of poly-alanine and possible relation to the debate on slaved versus slaving water. J. Chem. Phys., 142 (215104).

Ritschel, C. and Rust, H.W. and Ulbrich, U. (2017) Precipitation extremes on multiple time scales -- Bartlett-Lewis Rectangular Pulse Model and Intensity-Duration-Frequency curves. Hydrol. Earth Syst. Sci. . pp. 1-20. (Submitted)

Ritter, M. and Leever, K. and Rosenau, M. and Oncken, O. (2016) Scaling the Sand Box - Mechanical (Dis-) Similarities of Granular Materials and Brittle Rock. Journal of Geophysical Research: Solid Earth . (In Press)

Ritter, M. and Rosenau, M. and Oncken, O. (2017) Growing Faults in the Lab: Insights into the Scale Dependence of the Fault Zone Evolution Process. Tectonics, 36 . pp. 1-32.

Ritter, M. and Santimano, T.N. and Rosenau, M. and Leever, K. and Oncken, O. (2017) Sandbox rheometry: Coevolution of stress and strain in riedel- and critical wedge-experiments. Tectonophysics, 722 . pp. 400-409.

Rodal, M. and Schlutow, M. (2021) Waves in the gas centrifuge: Asymptotic theory and similarities with the atmosphere. Journal of Fluid Mechanics, 928 .

Rodrigues, D.R. and Everschor-Sitte, K. and Gerber, S. and Horenko, I. (2021) A deeper look into natural sciences with physics-based and data-driven measures. iSCIENCE, 24 (3). pp. 1-13. ISSN 102171

Rosemeier, Juliane and Haut, Terry and Wingate, Beth (2024) Multilevel Parareal Algorithm with Averaging for Oscillatory Problems. Numerical Algorithms for Scientific Computung, 46 (4). pp. 2709-2736.

Rosenau, M. and Leever, K. and Oncken, O. (2016) Experimental tectonics: Convergent plate margins. Earth Sys. Env. Sci. SFB 1114 Preprint . (Submitted)

Rosenau, M. and Horenko, I. and Corbi, F. and Rudolf, M. and Kornhuber, R. and Oncken, O. (2019) Synchronization of great subduction megathrust earthquakes: Insights from scale model analysis. Journal of Geophysical Research: Solid Earth, 124 (4). pp. 3646-3661. ISSN 2169-9356

Rosenau, M. and Rudolf, M. and Oncken, O. (2019) Creep on seismogenic faults: Insights from analogue earthquake experiments. SFB 1114 Preprint in EarthArXiv:10.31223/osf.io/24u5h . pp. 1-25. (Unpublished)

Royset, Johannes and Ruthotto, Lars and Schillings, Claudia and Surowiec, Thomas M. (2023) Workshop Report 21w5167 Optimization under Uncertainty: Learning and Decision Making in 2021. In: held virtually hosted by the, Feb 8 - 12, 2023, Banff International Research Station for Mathematical Innovation and Discovery (BIRS).

Rudolf, M. and Boutelier, D. and Rosenau, M. and Schreurs, G. and Oncken, O. (2016) Rheological benchmark of silicone oils used for analog modeling of short- and long-term lithospheric deformation. Tectonophysics, 684 . pp. 12-22.

Rudolf, M. and Rosenau, M. and Oncken, O. (2017) Interseismic deformation transients and precursory phenomena: Insights from stick-slip experiments with a granular fault zone. SFB 1114 Preprint in EarthArXiv:10.17605/OSF.IO/6MWRX . pp. 1-26.

Rudolf, M. and Rosenau, M. and Ziegenhagen, Th. and Ludwikowski, V. and Schucht, Torsten and Nagel, H. and Oncken, O. (2019) Smart Speed Imaging in Digital Image Correlation: Application to Seismotectonic Scale Modeling. Frontiers in Earth Science, 6 . p. 248.

Rudolf, Michael and Rosenau, Matthias and Oncken, Onno (2021) The spectrum of slip behaviours of a granular fault gouge analogue governed by rate and state friction. Geochemistry, Geophysics, Geosystems . pp. 1-40.

Ruprecht, D. and Klein, R. and Majda, A. J. (2010) Modulation of Internal Gravity Waves in a Multiscale Model for Deep Convection on Mesoscales. Journal.of the Atmospheric Sciences, 67 (8). pp. 2504-2519. ISSN Online 1520-0469, Print 0022-4928

Ruprecht, D. and Majda, A. J. and Klein, R. (2007) A multiscale model for the interaction of bulk microscale hot towers with convective scale motions. In: European Geosciences Union, General Assembly 2007, 15 – 20 April 2007, Vienna.

Ruprecht, D. and Schaedle, A. and Schmidt, F. and Zschiedrich, L. (2008) Transparent Boundary Conditions for Time-dependent Problems. SIAM J. Sci. Comput., 30 (5). pp. 2358-2385. ISSN 1064-8275

Ruprecht, D. (2010) Analysis of a Multi-Scale Asymptotic Model for Internal Gravity Waves in a Moist Atmosphere. PhD thesis, Freie Universität Berlin.

Ruprecht, D. and Klein, R. (2011) A Model for Nonlinear Interactions of Internal Gravity Waves with Saturated Regions. Meteorologische Zeitschrift, 20 (2). pp. 243-252.

Ruprecht, D. and Klein, R. and Majda, A. J. (2009) Moisture - Gravity Wave Interactions in a Multiscale Environment. Technical Report. Konrad Zuse Zentrum Berlin.

Ruprecht, D. and Schaedle, A. and Schmidt, F. and Zschiedrich, L. (2007) Transparent Boundary Conditions for Time-Dependent Problems. Technical Report. Konrad Zuse Zentrum Berlin.

Rähse, T.S. and Paschereit, C. O. and Stathopoulos, P. and Berndt, P. and Klein, R. (2017) Gas dynamic simulation of shockless explosion combustion for gas turbine power cycles. In: ASME Turbo-Expo 2017.

S

Sadeghi, Mohsen (2022) Investigating the entropic nature of membrane-mediated interactions driving the aggregation of peripheral proteins. Soft Matter (18). pp. 3917-3927.

Sadeghi, Mohsen and Noé, Frank (2021) Hydrodynamic coupling for particle-based solvent-free membrane models. The Journal of Chemical Physics, 155 (11).

Sadeghi, Mohsen and Noé, Frank (2020) Large-scale simulation of biomembranes incorporating realistic kinetics into coarse-grained models. Nature Communications, 11 (2951).

Sadeghi, Mohsen and Noé, Frank (2021) Thermodynamics and kinetics of aggregation of flexible peripheral membrane proteins. The Journal of Physical Chemistry Letters, 12 (43). pp. 10497-10504.

Sandiford, Dan and Brune, Sascha and Glerum, Anne and Naliboff, John and Whittaker, Joanne M. (2021) Kinematics of footwall exhumation at oceanic detachment faults: solid-block rotation and apparent unbending. Earth and Space Science Open Archive .

Santimano, T.N. and Rosenau, M. and Oncken, O. (2015) Intrinsic versus extrinsic variability of analogue sand-box experiments - Insights from statistical analysis of repeated accretionary sand wedge experiments. Journal of Structural Geology, 75 . pp. 80-100.

Schaedle, A. and Ruprecht, D. and Schmidt, F. (2009) Transparent Boundary Conditions Based on the Pole Condition. In: The 9th International Conference on Mathematical and Numerical Aspects of Waves Propagation, 15th-19th June 2009, Pau, France.

Schaedle, A. and Ruprecht, D. and Schmidt, F. (2007) Transparent boundary conditions - the pole condition approach. In: The 8th International Conference on Mathematical and Numerical Aspects of Waves, 23rd - 27th July 2007, Reading UK.

Schatzmann, M. and Britter, R. (2005) Quality assurance and improvement of micro-scale meteorological models. International Journal of Environment and Pollution . (Submitted)

Schatzmann, M. and Leitl, B. (2009) Evaluation of Numerical Flow and Dispersion Models for Applications in Industrial and Urban Areas. Chemical Engineering & Technology, 32 (2). 241 -246.

Schatzmann, M. and Leitl, B. (2008) Properties of field and wind tunnel boundary layers within and above the urban canopy. In: Atmospheric boundary layer flows in air pollution modelling. Karman Institute for Fluid Dynamics. ISBN 13 978-2-930389-85-0

Schebek, Maximilian and Invernizzi, Michele and Noé, Frank and Rogal, Jutta (2024) Efficient Mapping of Phase Diagrams with Conditional Boltzmann Generators. Preprint arXiv . (Unpublished)

Scheck, L. and Jones, S. and Heuveline , V. (2013) Singular Vectors for barotropic, hurricane-like vortices in horizontal shear: Structure and perturbation growth mechanisms. Journal of the Atmospheric Sciences . ISSN Online: 1520-0469 Print: 0022-4928 (Submitted)

Scheck, L. and Jones, S. and Juckes, . The Resonant Interaction of a Tropical Cyclone and a Tropopause Front in a Barotropic Model - Part I: Zonally-oriented front. Journal of Atmospheric Sciences . (Submitted)

Scheck, L. and Jones, S. and Juckes, . The Resonant Interaction of a Tropical Cyclone and a Tropopause Front in a Barotropic Model - Part II: Frontal waves. Journal of Atmospheric Sciences . (In Press)

Schillings, Claudia and Guth, Philipp A. and Weissmann, Simon (2021) A General Framework for Machine Learning based Optimization Under Uncertainty. . . (Submitted)

Schillings, Claudia and Schmidt, Stephan and Schulz, Volker (2011) Efficient shape optimization for certain and uncertain aerodynamic design. Elsevier, pp. 78-87.

Schillings, Claudia and Schulz, Volker (2014) On the influence of robustness measures on shape optimization with stochastic uncertainties. Optimization and Engineering, 16 . pp. 347-386. ISSN 1573-2924; Print 1389-4420

Schillings, Claudia and Schulz, Volker (2012) Problem Formulations and Treatment of Uncertainties in Aerodynamic Design. AIAA Journal, 47 (3).

Schillings, Claudia and Schwab, Christoph (2016) Scaling limits in computational Bayesian inversion. ESAIM: Mathematical Modelling and Numerical Analysis, 50 (6). pp. 1825-1856. ISSN 2822-7840; eISSN = 2804-7214

Schillings, Claudia and Schwab, Christoph (2013) Sparse, adaptive Smolyak quadratures for Bayesian inverse problems. Inverse Problems, 29 (6).

Schillings, Claudia and Schwab, Christoph (2014) Sparsity in Bayesian inversion of parametric operator equations. Inverse Problems, 30 (6).

Schillings, Claudia and Schwab, Christoph (2013) A note on sparse, adaptive Smolyak quadratures for Bayesian inverse problems. SAM Research Report, 06 .

Schillings, Claudia and Sprungk, Björn and Wacker, Philipp (2020) On the convergence of the Laplace approximation and noise-level-robustness of Laplace-based Monte Carlo methods for Bayesian inverse problems. Numerische Mathematik, 145 . pp. 915-971.

Schillings, Claudia and Sprungk, Björn and Wacker, Philipp (2020) On the convergence of the Laplace approximation and noise-level-robustness of Laplace-based Monte Carlo methods for Bayesian inverse problems. Numerische Mathematik, 145 (1). pp. 915-971.

Schillings, Claudia and Stuart, Andrew M. (2016) Analysis of the ensemble Kalman filter for inverse problems. arXiv .

Schillings, Claudia and Stuart, Andrew M. (2017) Convergence Analysis of the Ensemble Kalman Filter for Inverse Problems: the Noisy Case. ArXiv .

Schillings, Claudia and Stuart, Andrew M. (2017) Convergence analysis of ensemble Kalman inversion: the linear, noisy case. arXiv . (Submitted)

Schillings, Claudia and Sunnåker, Mikael and Stelling, Jörg and Schwab, Christoph (2015) Efficient characterization of parametric uncertainty of complex (bio) chemical networks. PLOS Computational Biology .

Schillings, Claudia and Totzeck, Claudia and Wacker, Philipp (2023) Ensemble-based gradient inference for particle methods in optimization and sampling. SIAM/ASA Journal on Uncertainty Quantification, 11 (3). pp. 757-787.

Schlegel, M. and Knoth, O. and Arnold, M. and Wolke, R (2009) Multirate Runge-Kutta schemes for advection equations. Journal of Computational and Applied Mathematics, 226 (2). pp. 345-357. ISSN 0377-0427

Schlegel, M. and Knoth, O. and Arnold, M. and Wolke, R (2010) Numerical solution of multiscale problems in atmospheric modeling. Applied Numerical Mathematics . (Submitted)

Schlegel, F. and Stiller, J. and Bienert, A. and Maas, H.-G and Queck, R. and Bernhofer, C. (2015) Large-Eddy Simulation Study of the Effects on Flow of a Heterogeneous Forest at Sub-tree Resolution. Boundary-Layer Meteorology, 154 . pp. 27-56.

Schlegel, F. and Stiller, J. and Bienert, A. and Maas, H.-G and Queck, R. and Bernhofer, C. (2012) Large-Eddy Simulation of inhomogeneous canopy flows using high resolution terrestrial laser scanning data. Boundary-Layer Meteorology, 142 . pp. 223-243. ISSN 0006-8314 (Print) 1573-1472 (Online)

Schlutow, M. and Becker, E. and Körnich, H. (2014) Positive definite and mass conserving tracer transport in spectral GCMs. Journal of Geophysical Research Atmospheres .

Schlutow, M. (2019) Modulational stability of nonlinear saturated gravity waves. Journal of the Atmospheric Sciences .

Schlutow, M. and Klein, R. and Achatz, U. (2017) Finite-amplitude gravity waves in the atmosphere: travelling wave solutions. Journal of Fluid Mechanics, 826 . pp. 1034-1065.

Schlutow, M. and Voelker, G.S. (2020) On strongly nonlinear gravity waves in a vertically sheared atmosphere. Mathematics of Climate and Weather Forecasting, 6 (1). pp. 63-74.

Schlutow, M. and Wahlén, E. (2020) Generalized modulation theory for nonlinear gravity waves in a compressible atmosphere. Mathematics of Climate and Weather Forecasting, 6 (1). pp. 97-112. ISSN 2353-6438 (online)

Schlutow, M. and Wahlén, E. and Birken, P. (2019) Spectral stability of nonlinear gravity waves in the atmosphere. Mathematics of Climate and Weather Forecasting, 5 (1). pp. 12-33. ISSN 2353-6438

Schmidt, H. and Klein, R. (2006) Extension of a front capturing/tracking scheme for premixed flames to a novel type of two scale turbulence modeling. In: Proc. SIAM Conference on Numerical Combustion, April 23 - 26, 2006, Granada, Spain.

Schmidt, H. and Klein, R. (2005) Flexible flame structure modelling in a flame front tracking scheme. Analysis and Numerics for Conservation Laws . pp. 405-427. ISSN 978-3-540-24834-7 (Print) 978-3-540-27907-5 (Online)

Schmidt, H. and Klein, R. (2001) Towards a Generalized Level-Set/In-Cell Reconstruction Approach for Accelerating Turbulent Premixed Flames.

Schmidt, H. and Klein, R. (2003) A generalized level-set/in-cell-reconstruction method for accelerating turbulent premixed flames. Combustion Theory and Modelling, 7 (2). 243-267(25).

Schmidt, H. and Mellado, J.- P. and Peters, N. and Kerstein, A.R. and Stevens, B. (2009) Numerical study of buoyancy reversal in stably stratified flows. Geophysical Research Abstracts, 11 . (Submitted)

Schmidt, H. and Mellado, J.- P. and Peters, N. and Stevens, B. (2008) Towards a modular superparameterization for Stratocumulus clouds considering unsteady entrainment. In: 4th PAN-GCSS Meeting on "Advances in Modeling and Observing Clouds and Convection", 2-6 June 2008, Toulouse, France.

Schmidt, H. and Mellado, J.- P. and Peters, N. and Stevens, B. (2008) Towards modular front tracking for Stratocumulus clouds considering unsteady entrainment processes. Geophysical Research Abstracts, 10 .

Schmidt, H. and Münch, M. and Klein, R. and Oevermann, M. (2006) A Zero Mach Number Projection Method Coupled To External Acoustics. In: 77th Annual Meeting of the Gesellschaft für Angewandte Mathematik und Mechanik e.V., March 27-31, 2006, TU-Berlin.

Schmidt, H. and Oevermann, M. and Bastiaans, R.J.M. and Kerstein, A.R. (2008) Tabulation of turbulent burning rates via a combination of a stochastic mixing model and tabulated chemistry. ZIB Report, 08 (2).

Schmidt, H. and Oevermann, M. and Bastiaans, R.J.M. and Kerstein, A.R. (2009) A priori Tabulation of Turbulent Flame Speeds via a Combination of a Stochastic Mixing Model and Flamelet Generated Manifolds, Extended to Incorporate Strain Effects. ZIB Report, 09-09 . ISSN 1438-0064

Schmidt, H. and Oevermann, M. and Münch, M. and Klein, R. (2006) Flame Front Capturing/Tracking Methods for Zero Mach Number Combustion. In: 31th Int. Symp. on Combustion, Aug 6-11, 2006, The Combustion Institute, Heidelberg.

Schmidt, H. and Oevermann, M. and Münch, M. and Klein, R. (2006) Flame front capturing/tracking schemes for compressible and incompressible reactive flow. TU Delft, The Netherlands , Proceedings of the European Conference on Computational Fluid Dynamics (ECCOMAS CFD). ISBN 90-9020970-0

Schmidt, H. and Veynante, D. and Klein, R. (2007) A Modular Two Scale Capturing/Tracking Scheme for Turbulent Premixed Flames. In: 21th Intl. Colloquium on the Dynamics of Explosions and Reactive Systems, 2007, Poitiers.

Schmidt, F. and Gagarina, E. and Klein, R. and Achatz, U. (2021) Toward a Numerical Laboratory for Investigations of Gravity Wave–Mean Flow Interactions in the Atmosphere. Monthly Weather Review, 149 (12). pp. 4005-4026.

Schmidt, F. and Gagarina, E. and Klein, R. and Achatz, U. (2021) Towards a numerical laboratory for investigations of gravity-wave 2 mean-ow interactions in the atmosphere. Monthly Weather Review MWR-D-21-0126 . pp. 1-75. (Submitted)

Schneider, T. and Klein, R. (1999) Overcoming Mass Losses in Level-Set-Based Interface Tracking Schemes. In: 2nd International Conference on Finite Volume for Complexe Application, 1999.

Schneider, T. and Botta, N. and Geratz, K. J. and Klein, R. (1999) Extension of finite volume compressible flow solvers to multidimensional, variable density zero Mach number flows. J. Comput. Phys., 155 . pp. 248-286.

Schreurs, G. and et al, . (2016) Benchmarking analogue models of brittle thrust wedges. J. Struct. Geol. . (In Press)

Schulz, Julius C. F. and Schlaich, Alexander and Heyden, Matthias and Netz, Roland R. and Kappler, Julian (2020) Molecular interpretation of the non-Newtonian viscoelastic behavior of liquid water at high frequencies. Phys. Rev. Fluids, 5 .

Schulz, R. and Hansen, Y. von and Daldrop, J.O. and Kappler, J. and Noé, F. and Netz, R.R. (2018) Markov state modeling reveals competing collective hydrogen bond rearrangements in liquid water. SFB 1114 Preprint 02/2018 . (Unpublished)

Schulz, R. and von Hansen, Y. and Daldrop, J.O. and Kappler, J. and Noé, F. and Netz, R.R. (2018) Collective hydrogen-bond rearrangement dynamics in liquid water. J. Chem. Phys., 149 (24). -244504. ISSN 0021-9606, ESSN: 1089-7690

Schulz, Robert and Yamamoto, Kenji and Klossek, André and Rancan, Fiorenza and Vogt, Annika and Schütte, Christof and Rühl, Eckart and Netz, Roland R. (2019) Modeling of Drug Diffusion Based on Concentration Profiles in Healthy and Damaged Human Skin. Biophysical Journal, 117 (5). pp. 998-1008. ISSN 00063495

Schulz, Volker and Schillings, Claudia (2013) Optimal aerodynamic design under uncertainty. In: Management and Minimisation of Uncertainties and Errors in Numerical Aerodynamics. Notes on Numerical Fluid Mechanics and Multidisciplinary Design, 122 . Springer, Berlin, Heidelberg, pp. 297-338. ISBN 978-3-642-36184-5 Online: 978-3-642-36185-2

Schuster, I. and Constantine, P.G. and Sullivan, T.J. (2017) Exact active subspace Metropolis-Hastings, with applications to the Lorenz-96 system. SFB 1114 Preprint in arXiv:1712.02749 . pp. 1-10. (Unpublished)

Schuster, I. and Strathmann, H. and Paige, B. and Sejdinovic, Dino (2015) Kernel Sequential Monte Carlo. SFB 1114 Preprint in arXiv:1510.03105 . (Submitted)

Schuster, Ingmar and Mollenhauer, Mattes and Klus, Stefan and Muandet, K. (2020) Kernel Conditional Density Operators. In: 23rd International Conference on Artificial Intelligence and Statistics (AISTATS), August 26 - 28, 2020, Online.

Schwab, Christoph and Schillings, Claudia (2013) Sparse Quadrature Approach to Bayesian Inverse Problems. In: SIAM Conference on Computational Science and Engineering.

Schwab, Christoph and Schillings, Claudia (2012) Sparse, adaptive Smolyak algorithms for Bayesian inverse problems. Research Report No. 2012-37 .

Schwieger, Robert and Siebert, Heike (2022) Structure and behavior in Boolean monotonic model pools. Elsevier, Biosystems.

Schäpel, J.S. and Wolff, S. and Schulze, P. and Berndt, P. and Klein, R. and Mehrmann, V. and King, R. (2017) State estimation for reactive Euler equation by Kalman Filtering. CEAS Aeronautical Journal, 1 (10). pp. 261-270. ISSN 1869-5582

Schäpel, J.S. and King, R. and Yücel, F. and Völzke, F. and Paschereit, O. C. and Klein, R. (2018) Fuel injection control for a valve array in a Shockless Explosion Combustor. In: ASME Turbo Expo 2018: Turbomachinery Technical Conference and Exposition, June 11–15, 2018, Oslo, Norway.

Schütte, Ch. and Sarich, M. (2015) A Critical Appraisal of Markov State Models. SFB 1114 Preprint, 15-18 . ISSN 1438-0064

Schütte, Ch. and Sarich, M. (2013) Metastability and Markov State Models in Molecular Dynamics: Modeling, Analysis, Algorithmic Approaches. Courant Lecture Notes, 24 . American Mathematical Society. ISBN 0821843591

Schütte, Ch. and Winkelmann, S. and Hartmann, C. (2012) Optimal control of molecular dynamics using Markov state models. Math. Program. (Series B), 134 (1). pp. 259-282.

Schütte, Christof and Klus, Stefan and Hartmann, Carsten (2023) Overcoming the Timescale Barrier in Molecular Dynamics: Transfer Operators, Variational Principles, and Machine Learning. Acta Numerica, 32 . pp. 517-673.

Sechi, Renata and Sikorski, Alexander and Weber, Marcus (2021) Estimation of the Koopman Generator by Newton's Extrapolation. Multiscale Modeling & Simulation, 19 (2). pp. 758-774.

Sechi, Renata and Sikorski, Alexander and Weber, Marcus (2021) Estimation of the Koopman generator by Newton’s extrapolation. SIAM Multiscale Modeling & Simulation, 19 (2). pp. 758-774. ISSN print: 1540-3459; online: 1540-3467

Seeber, L. and Conrad, T. O. F. and Hoppe, Ch. and Obermeier, P. and Chen, X. and Karsch, K. and Muehlhans, S. and Tief, F. and Boettcher, S. and Diedrich, S. and Schweiger, B. and Rath , B. (2017) Educating parents about the vaccination status of their children: A user-centered mobile application. Preventive Medicine Reports, 5 . pp. 241-250.

Senne, M. and Trendelkamp-Schroer, B. and Mey, A.S.J.S. and Schütte, Ch. and Noé, F. (2012) EMMA - A software package for Markov model building and analysis. Journal of Chemical Theory and Computation, 8 . pp. 2223-2238.

Shadrack Jabes, B. and Delle Site, L. (2018) Nanoscale domains in Ionic Liquids: A statistical mechanics definition for molecular dynamics studies. J. Chem. Phys., 149 (18). p. 184502. ISSN 0021-9606, ESSN: 1089-7690

Shadrack Jabes, B. and Klein, R. and Delle Site, L. (2018) Structural Locality and Early Stage of Aggregation of Micelles in Water: An Adaptive Resolution Molecular Dynamics Study. Advanced Theory & Simulations, 1 (6).

Shadrack Jabes, B. and Krekeler, C. and Klein, R. and Delle Site, L. (2018) Probing Spatial Locality in Ionic Liquids with the Grand Canonical Adaptive Resolution Molecular Dynamics Technique. The Journal of Chemical Physics, 148 (19). ISSN online: 1089-7690

Shao, Borong and Carlo, Cannistraci and Conrad, T. O. F. (2017) Epithelial Mesenchymal Transition Network-based Feature Engineering in Lung Adenocarcinoma Prognosis Prediction Using Multiple Omic Data. Genomics and Computational Biology, 3 (3). ISSN 2365-7154

Shao, Borong and Conrad, T. O. F. (2016) Epithelial Mesenchymal Transition Regulatory Network-based Feature Selection in Lung Cancer Prognosis Prediction. Lecture Notes in Computer Science (LNCS): Proceeding of IWBBIO 2016, 9656 .

Siewert, C. and Bordás, R. and Wacker, U. and Beheng, K.D. and Kunnen, R. P. J. and Meinke, M. and Schröder, W. and Thévenin, D. (2014) Influence of turbulence on the drop growth in warm clouds, Part I: comparison of numerically and experimentally determined collision kernels. Meteorologische Zeitschrift, 23 (4). 397 -410.

Siewert, C. and Kunnen, R. P. J. and Meinke, M. and Schröder, W. (2013) Numerical Investigation of the Combined Effects of Gravity and Turbulence on the Motion of Small and Heavy Particles. In: New Results in Numerical and Experimental Fluid Mechanics IX. Springer Berlin Heidelberg. (Submitted)

Siewert, C. and Kunnen, R. P. J. and Meinke, M. and Schröder, W. (2013) Orientation Statistics and Settling Velocity of Ellipsoids in Decaying Turbulence. Atmospheric Research . (In Press)

Sikorski, Alexander and Ribera Borrell, Enric and Weber, Marcus (2024) Learning Koopman eigenfunctions of stochastic diffusions with optimal importance sampling and ISOKANN. Journal of Mathematical Physics, 65 (1).

Sikorski, Alexander and Weber, Marcus and Schütte, Christof (2021) The augmented jump chain – a sparse representationof time-dependent Markov jump processes. Advanced Theory and Simulations, 4(4):2000274, 2021, 4 (4).

Sloan, Ian H. and Kaarnioja, Vesa Doubling the rate – improved error bounds for orthogonal projection in Hilbert spaces. arXiv . (Submitted)

Smiljanovski, V. and Klein, R. (1994) Flame Front Tracking via in-Cell Reconstruction. In: Proceedings of 5th International Conference on Hyperbolic Systems, June 1994, SUNY Stony Brook.

Smiljanovski, V. and Moser, V. and Klein, R. (1997) A Capturing/Tracking Hybrid Scheme for Deflagration Discontinuities. Combustion Theory and Modelling, 1 (2). 183-215 .

Smit, Matthijs and Vrijmoed, Johannes C. and Scherer, Erik E. and Mezger, Klaus and Kooijman, Ellen and Schmitt-Kielmann, Melanie and Tual, Lorraine and Guilmette, Carl and Ratschbacher, Lothar (2024) Retentiveness of rare earth elements in garnet with implications for garnet Lu-Hf chronology. Journal of Metamorphic Geology .

Soucek, Ondrej and Heida, Martin and Malek, Josef (2020) On a thermodynamic framework for developing boundary conditions for Korteweg-type fluids. International Journal of Engineering Science, 154 . pp. 1-28.

Stenke, A. and Dameris, M. and Grewe, V. and Garny, H. (2009) Implications of Lagrangian transport for simulations with a coupled chemistry-climate model. Atmospheric Chemistry and Physics, 9 . pp. 5489-5504.

Stensitzki, T. and Yang, Y. and Kozich, V. and Ahmed, A.A. and Kössl, F. and Kühn, O. and Heyne, K. (2018) Acceleration of a ground-state reaction by selective femtosecond-infrared-laser-pulse excitation. Nature Chemistry, 10 . pp. 126-131.

Stephan, Artur (2021) EDP-convergence for a linear reaction-diffusion system with fast reversible reaction. Calculus of Variations, 60 (226). pp. 1-35.

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