Number of items: **35**.

## 2017

von Larcher, T. and Klein, R.
(2017)
*On identification of self-similar characteristics using the Tensor Train decomposition method with application to channel turbulence flow.*
Theoretical and Computational Fluid Dynamics
.
pp. 1-22.
ISSN 0935-4964 (Print) 1432-2250 (Online)
(Submitted)

Gerber, S. and Olsson, S. and Noé, F. and Horenko, I.
(2017)
*A scalable approach to the computation of invariant measures for high-dimensional Markovian systems.*
SFB 1114 Preprint
.
pp. 1-22.
(Unpublished)

Gerber, S. and Horenko, I.
(2017)
*Toward a direct and scalable identification of reduced models for categorical processes.*
Proceedings of the National Academy of Sciences, 114
(19).
pp. 4863-4868.

Kornhuber, R. and Podlesny, J. and Yserentant, H.
(2017)
*Direct and Iterative Methods for Numerical Homogenization.*
In:
Domain Decomposition Methods in Science and Engineering.
Lecture Notes in Computational Science and Engineering, XXIII
(116).
SpringerLink, pp. 217-225.
ISBN 978-3-319-52389-7

Donati, L. and Hartmann, C. and Keller, B.G.
(2017)
*Girsanov reweighting for path ensembles and Markov state models.*
SFB 1114 Preprint
.
(Submitted)

Pipping, E.
(2017)
*Existence of long-time solutions to dynamic problems of viscoelasticity with rate-and-state friction.*
SFB 1114 Preprint
.
(Submitted)

Quer, J. and Donati, L. and Keller, B.G. and Weber, M.
(2017)
*An automatic adaptive importance sampling algorithm for molecular dynamics in reaction coordinates.*
SIAM J. Sci. Comput.
.
pp. 1-19.
ISSN 1064-8275 (print)
(Submitted)

Dellnitz, M. and Klus, S. and Ziessler, A.
(2017)
*A Set-Oriented Numerical Approach for Dynamical Systems with Parameter Uncertainty.*
SIAM Journal on Applied Dynamical Systems, 16
(1).
pp. 120-138.
ISSN 1536-0040

Klus, S. and Nüske, F. and Koltai, Péter and Wu, H. and Kevrekidis, Ioannis and Schütte, Ch. and Noé, F.
(2017)
*Data-driven model reduction and transfer operator approximation.*
J. Nonlin. Sci.
.
(Submitted)

## 2016

Klus, S. and Schütte, Ch.
(2016)
*Towards tensor-based methods for the numerical approximation of the Perron-Frobenius and Koopman operator.*
Journal of Computational Dynamics
.
ISSN 2158-2491

Mielke, A. and Roubícek, T.
(2016)
*Rate-Independent elastoplasticity at finite strain and its numerical approximation.*
Mathematical Models and Methods in Applied Sciences, 26
(12).
pp. 2203-2236.
ISSN 1793-6314

Kornhuber, R. and Peterseim, D. and Yserentant, H.
(2016)
*An analysis of a class of variational multiscale methods based on subspace decomposition.*
Mathematics of Computation
.
ISSN 0025-5718
(In Press)

Klus, S. and Koltai, Péter and Schütte, Ch.
(2016)
*On the numerical approximation of the Perron-Frobenius and Koopman operator.*
Journal of Computational Dynamics, 3
(1).
pp. 51-79.
ISSN 2158-2491

Klinkmüller, M. and Schreurs, G. and Rosenau, M. and Kemnitz, H.
(2016)
*Properties of granular analogue materials: A community wide survey.*
Tectonophysics, 666
.
pp. 23-38.

Klus, S. and Gelß, P. and Peitz, S. and Schütte, Ch.
(2016)
*Tensor-based dynamic mode decomposition.*
SIAM Journal on Scientific Computing
.
ISSN ISSN 1064-8275 (print); 1095-7197 (electronic)
(Submitted)

Kornhuber, R. and Yserentant, H.
(2016)
*Numerical Homogenization of Elliptic Multiscale
Problems by Subspace Decomposition.*
Multiscale Model. Simul., 14
(3).
pp. 1017-1036.
ISSN print: 1540-3459; online: 1540-3467

Lemke, O. and Keller, B.G.
(2016)
*Density-based cluster algorithms for the identification of core sets.*
Journal of Chemical Physics, 145
(164104).

Pipping, E. and Kornhuber, R. and Rosenau, M. and Oncken, O.
(2016)
*On the efficient and reliable numerical solution of rate-and-state friction problems.*
Geophysical Journal International, 204
(3).
pp. 1858-1866.
ISSN Online: 1365-246X Print: 0956-540X

Ritter, M. and Leever, K. and Rosenau, M. and Oncken, O.
(2016)
*Scaling the Sand Box - Mechanical (Dis-) Similarities of Granular Materials and Brittle Rock.*
Journal of Geophysical Research: Solid Earth
.
(In Press)

Rosenau, M. and Leever, K. and Oncken, O.
(2016)
*Experimental tectonics: Convergent plate margins.*
Earth Sys. Env. Sci. SFB 1114 Preprint
.
(Submitted)

Rudolf, M. and Boutelier, D. and Rosenau, M. and Schreurs, G. and Oncken, O.
(2016)
*Rheological benchmark of silicone oils used for analog modeling of short- and long-term lithospheric deformation.*
Tectonophysics, 666
.
pp. 12-20.

Schreurs, G. and et al, .
(2016)
*Benchmarking analogue models of brittle thrust wedges.*
J. Struct. Geol.
.
(In Press)

Vitalini, F. and Noé, F. and Keller, B.
(2016)
*Molecular dynamics simulations data of the twenty encoded amino acids in different force fields.*
Data in Brief, 7
.
pp. 582-590.

## 2015

Enciso, M. and Schütte, Ch. and Delle Site, L.
(2015)
*Influence of pH and sequence in peptide aggregation via
molecular simulation.*
Journal of Chemical Physics, 143
(24).
p. 243130.
ISSN 0021-9606

Bittracher, Andreas and Hartmann, C. and Junge, O. and Koltai, Péter
(2015)
*Pseudo generators for under-resolved molecular dynamics.*
The European Physical Journal Special Topics, 224
(12).
pp. 2463-2490.
ISSN 1951-6355

Hartmann, C. and Delle Site, L.
(2015)
*Scale Bridging in Molecular Simulation.*
The European Physical Journal Special Topics, 224
(12).
pp. 2173-2176.
ISSN 1951-6355

Schütte, Ch. and Sarich, M.
(2015)
*A Critical Appraisal of Markov State Models.*
SFB 1114 Preprint, 15-18
.
ISSN 1438-0064

Di Giuseppe, E. and Corbi, F. and Funiciello, F. and Massmeyer, A. and Santimano, T.N. and Rosenau, M. and Davaille, A.
(2015)
*Characterization of Carbopol hydrogel rheology for experimental tectonics and geodynamics, , 642, 29-45, doi:10.1016/j.tecto.2014.12.005.*
Tectonophysics
.
pp. 29-45.

Horenko, I. and Gerber, S.
(2015)
*Improving clustering by imposing network information.*
Science Advances, 1
(7).
ISSN 2375-2548

Kim, W.K. and Netz, R.R.
(2015)
*The mean shape of transition and first-passage paths.*
The Journal of Chemical Physics, 143
(224108).

Li, S. and Moreno, M. and Bedford, J. and Rosenau, M. and Oncken, O.
(2015)
*Revisiting viscoelastic effects on interseismic deformation and locking degree: A case study of the Peru-North Chile subduction zone.*
Journal of Geophysical Research-Solid Earth, 120
(6).
pp. 4522-4538.

Rinne, K.F. and Schulz, J.C.F. and Netz, R.R.
(2015)
*Impact of secondary structure and hydration water on the dielectric spectrum of poly-alanine and possible relation to the debate on slaved versus slaving water.*
The Journal of Physical Chemistry
.

Santimano, T.N. and Rosenau, M. and Oncken, O.
(2015)
*Intrinsic versus extrinsic variability of analogue sand-box experiments - Insights from statistical analysis of repeated accretionary sand wedge experiments.*
Journal of Structural Geology, 75
.
pp. 80-100.

Schulz, J.C.F. and Miettinen, M.S. and Netz, R.R.
(2015)
*Unfolding and Folding Internal Friction of β‑Hairpins Is Smaller than That of α‑Helices.*
Journal of Physical Chemistry B, 119
(13).
pp. 4565-4574.

Vitalini, F. and Noé, F. and Keller, B.
(2015)
*A basis set for peptides for the variational approach to conformational kinetics.*
J. Chem. Theory Comput., 11
.
pp. 3992-4004.

This list was generated on **Sat Nov 18 23:40:14 2017 CET**.