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Group by: Date | Item Type Number of items: 7. 2023Mehringer, Svenja and Seiler, Enrico and Droop, Felix and Darvish, Mitra and Rahn, René and Vingron, Martin and Reinert, Knut (2023) Hierarchical Interleaved Bloom Filter: enabling ultrafast, approximate sequence queries. Genome Biology, 24 (131). ISSN 1474-760X 2022Darvish, Mitra and Seiler, Enrico and Mehringer, Svenja and Rahn, René and Reinert, Knut and Ponty, Yann (2022) Needle: a fast and space-efficient prefilter for estimating the quantification of very large collections of expression experiments. Bioinformatics, 38 (17). pp. 4100-4108. ISSN 1367-4803 Knaust, Marius and Seiler, Enrico and Reinert, Knut and Steinke, Thomas (2022) Co-Design for Energy Efficient and Fast Genomic Search: Interleaved Bloom Filter on FPGA. In: The 2022 ACM/SIGDA International Symposium on Field-Programmable Gate Arrays (FPGA '22), 27 February - 1 March 2022, virtual. 2021Seiler, Enrico and Mehringer, Svenja and Darvish, Mitra and Turc, Etienne and Reinert, Knut (2021) Raptor: A fast and space-efficient pre-filter for querying very large collections of nucleotide sequences. iScience, 24 (7). p. 102782. ISSN 25890042 2020Renard, Bernhard Y and Reinert, Knut and Seiler, Enrico and Dadi, Temesgen H and Piro, Vitor C (2020) ganon: precise metagenomics classification against large and up-to-date sets of reference sequences. Bioinformatics, 36 (Supple). i12-i20. ISSN 1367-4803 2019Seiler, Enrico and Trappe, Kathrin and Renard, Bernhard Y. (2019) Where did you come from, where did you go: Refining metagenomic analysis tools for horizontal gene transfer characterisation. PLOS Computational Biology, 15 (7). e1007208. ISSN 1553-7358 2018Dadi, Temesgen Hailemariam and Siragusa, Enrico and Piro, Vitor C and Andrusch, Andreas and Seiler, Enrico and Renard, Bernhard Y and Reinert, Knut (2018) DREAM-Yara: an exact read mapper for very large databases with short update time. Bioinformatics, 34 (17). i766-i772. ISSN 1367-4803 |
