Repository: Freie Universit├Ąt Berlin, Math Department

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Number of items: 8.

2007

Reinert, K. and Huson, D. H. (2007) Sequence Assembly. In: UNSPECIFIED Bioinformatics - From Genomes to Therapies, 1 . Wiley-VCH, Weinheim, pp. 25-55.

2004

Istrail, S. and Sutton, G. G. and Florea, L. and Mobarry, C. M. and Lippert, R. and Walenz, B. and Shatkay, H. and Dew, Ian and Miller, J. R. and Flanigan, M. J. and Edwards, N. J. and Bolanos, R. and Fasulo, D. and Halldorsson, B. V. and Hannenhalli, S. and Turner, R. J. and Yooseph, S. and Lu, Fu and Nusskern, D. R. and Shue, B. C. and Zheng, X. H. and Zhong, F. and Delcher, A. L. and Huson, D. H. and Kravitz, S. A. and Mouchard, L. and Reinert, K. and Remington, K. A. and Clark, A. G. and Waterman, M. S. and Eichler, E. E. and Adams, M. D. and Hunkapillar, M. W. and Myers, E. W. and Venter, J. C. (2004) Whole-genome shotgun assembly and comparison of human genome assemblies. Proceedings of the national academy of science (PNAS), 101 (7). pp. 1916-1921.

2002

Huson, D. H. and Reinert, K. and Myers, E. W. (2002) The Greedy Path-Merging Algorithm for Sequence Assembly. Journal of the ACM, 49 (5). pp. 603-615.

Halpern, A. L. and Huson, D. H. and Reinert, K. (2002) Segment Match refinment and applications. In: Proceedings of the 2nd Workshop on Algorithms Bioinformatics (WABI-02).

2001

Huson, D. H. and Halpern, A. L. and Lai, Z. and Myers, E. W. and Reinert, K. and Sutton, G. G. (2001) Comparing Assemblies using Fragments and Mate-pairs. In: Proceedings of the 1st Workshop on Algorithms Bioinformatics (WABI-01).

Huson, D. H. and Reinert, K. and Kravitz, S. A. and Remington, K. A. and Delcher, A. L. and Dew, I. M. and Flanigan, M. J. and Halpern, A. L. and Lai, Z. and Mobarry, C. M. and Sutton, G. G. and Myers, E. W. (2001) Design of a compartmentalized Shotgun Assembler for the Human Genome. In: Proceedings of the Ninth International Conference on Intelligent Systems for Molecular Biology (ISMB-01).

Huson, D. H. and Reinert, K. and Myers, E. W. (2001) The Greedy Path-Merging Algorithm for Sequence Assembly. In: Proceedings of the Fifth Annual International Conference on Computational Molecular Biology (RECOMB-01).

Turner, R. J. and Chaturvedi, K. and Edwards, N. J. and Halpern, A. L. and Huson, D. H. and Kohlbacher, O. and Miller, J. R. and Reinert, K. and Remington, K. A. and Schwartz, R. and Walenz, B. and Yooseph, S. and Istrail, S. (2001) Visualization Challenges for a New Cyberpharmaceutical Computing. In: IEEE 2001 Symposium on Parallel and Large-Data Visualization and Graphics.

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