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Article

Bauer, M. and Baumann, M. and Scheck, L. and Gassmann, A. and Heuveline , V. and Jones, S. (2014) Simulation of tropical-cyclone-like vortices in shallow-water ICON-hex using goal-oriented r-adaptivity. Theoretical and Computational Fluid Dynamics, 28 (1). pp. 107-128. ISSN Print: 0935-4964 Online:1432-2250

Bauer, M. and Klau, G. W. and Reinert, K. (2008) An Exact Mathematical Programming Approach to Multiple RNA Sequence-Structure Alignment. Algorithmic Operations Research .

Bauer, M. and Klau, G. W. and Reinert, K. (2007) Accurate multiple sequence-structure alignment of RNA sequences using combinatorial optimization. BMC Bioinformatics, 8 (1). p. 271.

Conference or Workshop Item

May, P. and Klau, G. W. and Bauer, M. and Steinke, T. (2007) Accelerated microRNA Precursor Detection Using the Smith-Waterman Algorithm on FPGAs. In: Proc. of GCCB 2006.

Reinert, K. and Bauer, M. and Döring, A. and Halpern, A. L. (2007) A general paradigm for fast and adaptive clustering of biological sequences. In: German Conference on Bioinformatics (GCB 2007).

Bauer, M. and Klau, G. W. and Reinert, K. (2005) Fast and Accurate Structural RNA Alignment by Progressive Lagrangian Relaxation. In: Proceedings of the 1st International Symposium on Computational Life Science (CompLife-05).

Bauer, M. and Klau, G. W. and Reinert, K. (2005) Multiple Structural RNA Alignment with Lagrangian Relaxation. In: Proceedings of the 5th Workshop on Algorithms Bioinformatics (WABI-05).

Bauer, M. and Klau, G. W. (2004) Structural Alignment of Two RNA Sequences with Lagrangian Relaxation. In: Proceedings of the 15th International Symposium, ISAAC 2004, Hong Kong.